RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CHFRQ96EP1 664 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 ZFRQ96KR1 1074 aaKnown RBP16.19■□□□□ 0.18
CPSF1-210ENST00000532935 NACA2Q9H009 215 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 LINC00597Q9H2U6 94 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 ECT2Q9H8V3 914 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 NMUR1Q9HB89 426 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 UBE2TQ9NPD8 197 aaPredicted RBP16.19■□□□□ 0.18
CPSF1-210ENST00000532935 CYLDQ9NQC7 956 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 OSER1Q9NX31 292 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 CFAP97Q9P2B7 532 aa16.19■□□□□ 0.18
CPSF1-210ENST00000532935 TULP2O00295 520 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 XPO1O14980 1071 aaKnown RBP16.18■□□□□ 0.18
CPSF1-210ENST00000532935 PRKCSHP14314 528 aaPredicted RBP16.18■□□□□ 0.18
CPSF1-210ENST00000532935 SLC9A1P19634 815 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 PSEN1P49768 467 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 ZNF132P52740 706 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 AMPD2Q01433 879 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 LRRC32Q14392 662 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 EXOC3L4Q17RC7 722 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 CCDC183Q5T5S1 534 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 SASS6Q6UVJ0 657 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 SCD5Q86SK9 330 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 UBA3Q8TBC4 463 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 PHOX2BQ99453 314 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 ZSWIM1Q9BR11 485 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 TUBGCP2Q9BSJ2 902 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 ANP32EQ9BTT0 268 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 CHRDQ9H2X0 955 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 SAMSN1Q9NSI8 373 aaKnown RBP16.18■□□□□ 0.18
CPSF1-210ENST00000532935 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.18■□□□□ 0.18
CPSF1-210ENST00000532935 NAGPAQ9UK23 515 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 CNTN6Q9UQ52 1028 aa16.18■□□□□ 0.18
CPSF1-210ENST00000532935 PIEZO1Q92508 2521 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 E2F8A0AVK6 867 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 KCNJ18B7U540 433 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 SLC9A3R1O14745 358 aaPredicted RBP16.17■□□□□ 0.18
CPSF1-210ENST00000532935 SCAMP3O14828 347 aaKnown RBP16.17■□□□□ 0.18
CPSF1-210ENST00000532935 LAMTOR5O43504 91 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 NFATC1O95644 943 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 TBX18O95935 607 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 CALCAP01258 141 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 SETSIPP0DME0 302 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 RARGP13631 454 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 KRT5P13647 590 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 PTMSP20962 102 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 BRD2P25440 801 aaKnown RBP16.17■□□□□ 0.18
CPSF1-210ENST00000532935 PON1P27169 355 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 GJA4P35212 333 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 ATP5C1P36542 298 aaKnown RBP16.17■□□□□ 0.18
CPSF1-210ENST00000532935 TKTL1P51854 596 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 MFAP3P55082 362 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 NR1H3Q13133 447 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 KCNJ12Q14500 433 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 STILQ15468 1287 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 NFKBIBQ15653 356 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 CNGA2Q16280 664 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 VWA3BQ502W6 1294 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 PKDCCQ504Y2 493 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 MIIPQ5JXC2 388 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 GJB7Q6PEY0 223 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 ENOSF1Q7L5Y1 443 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 MAML2Q8IZL2 1156 aaPredicted RBP16.17■□□□□ 0.18
CPSF1-210ENST00000532935 ENOX1Q8TC92 643 aaKnown RBP16.17■□□□□ 0.18
CPSF1-210ENST00000532935 FAM81BQ96LP2 452 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 IER2Q9BTL4 223 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 RBM12Q9NTZ6 932 aaKnown RBP16.17■□□□□ 0.18
CPSF1-210ENST00000532935 APEX2Q9UBZ4 518 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.17■□□□□ 0.18
CPSF1-210ENST00000532935 NFE2L3Q9Y4A8 694 aa16.17■□□□□ 0.18
CPSF1-210ENST00000532935 WDR87Q6ZQQ6 2873 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 TRDMT1O14717 391 aaKnown RBP16.16■□□□□ 0.18
CPSF1-210ENST00000532935 IRF1P10914 325 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 PLA2G4AP47712 749 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 APBA1Q02410 837 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 MTAPQ13126 283 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 CCINQ13939 588 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 TMEM196Q5HYL7 178 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 DGKKQ5KSL6 1271 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 PM20D1Q6GTS8 502 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 KLHDC10Q6PID8 442 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 ZNF276Q8N554 614 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 KLF16Q9BXK1 252 aaPredicted RBP16.16■□□□□ 0.18
CPSF1-210ENST00000532935 NDST4Q9H3R1 872 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 LRRC4Q9HBW1 653 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 ANO10Q9NW15 660 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 CLIC5Q9NZA1 410 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 TBC1D14Q9P2M4 693 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 NUDT5Q9UKK9 219 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 SH3BP1Q9Y3L3 701 aa16.16■□□□□ 0.18
CPSF1-210ENST00000532935 M0QYV0 167 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 MDM4O15151 490 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 ZBED1O96006 694 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 CYP17A1P05093 508 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 SP9P0CG40 484 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 RALAP11233 206 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 EEF1GP26641 437 aaKnown RBP16.15■□□□□ 0.18
CPSF1-210ENST00000532935 GRSF1Q12849 480 aaKnown RBP eCLIP16.15■□□□□ 0.18
CPSF1-210ENST00000532935 STX1AQ16623 288 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 ARHGAP44Q17R89 818 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 TCP11X2Q5H9J9 407 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms