RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 NFATC1O95644 943 aa18.81■□□□□ 0.6
SMG1-203ENST00000532700 CALCAP01258 141 aa18.81■□□□□ 0.6
SMG1-203ENST00000532700 HNRNPLP14866 589 aaKnown RBP eCLIP18.81■□□□□ 0.6
SMG1-203ENST00000532700 ACO1P21399 889 aaKnown RBP18.81■□□□□ 0.6
SMG1-203ENST00000532700 PDE6CP51160 858 aa18.81■□□□□ 0.6
SMG1-203ENST00000532700 SEC13P55735 322 aa18.81■□□□□ 0.6
SMG1-203ENST00000532700 TTI2Q6NXR4 508 aa18.81■□□□□ 0.6
SMG1-203ENST00000532700 PRR23BQ6ZRT6 265 aa18.81■□□□□ 0.6
SMG1-203ENST00000532700 LONP2Q86WA8 852 aa18.81■□□□□ 0.6
SMG1-203ENST00000532700 PHTF2Q8N3S3 785 aa18.81■□□□□ 0.6
SMG1-203ENST00000532700 UBR7Q8N806 425 aa18.81■□□□□ 0.6
SMG1-203ENST00000532700 NCDNQ9UBB6 729 aa18.81■□□□□ 0.6
SMG1-203ENST00000532700 COQ4Q9Y3A0 265 aa18.81■□□□□ 0.6
SMG1-203ENST00000532700 TRIM24O15164 1050 aa18.8■□□□□ 0.6
SMG1-203ENST00000532700 TLR5O60602 858 aa18.8■□□□□ 0.6
SMG1-203ENST00000532700 DRD1P21728 446 aa18.8■□□□□ 0.6
SMG1-203ENST00000532700 FKBP3Q00688 224 aaKnown RBP18.8■□□□□ 0.6
SMG1-203ENST00000532700 KDSRQ06136 332 aa18.8■□□□□ 0.6
SMG1-203ENST00000532700 LRMPQ12912 555 aa18.8■□□□□ 0.6
SMG1-203ENST00000532700 MORC3Q14149 939 aa18.8■□□□□ 0.6
SMG1-203ENST00000532700 LY6G5CQ5SRR4 150 aa18.8■□□□□ 0.6
SMG1-203ENST00000532700 KLHL10Q6JEL2 608 aa18.8■□□□□ 0.6
SMG1-203ENST00000532700 TTC30AQ86WT1 665 aa18.8■□□□□ 0.6
SMG1-203ENST00000532700 KAT5Q92993 513 aa18.8■□□□□ 0.6
SMG1-203ENST00000532700 TSG101Q99816 390 aa18.8■□□□□ 0.6
SMG1-203ENST00000532700 KLF16Q9BXK1 252 aaPredicted RBP18.8■□□□□ 0.6
SMG1-203ENST00000532700 SCML2Q9UQR0 700 aa18.8■□□□□ 0.6
SMG1-203ENST00000532700 TUBP50607 506 aa18.79■□□□□ 0.6
SMG1-203ENST00000532700 KIF11P52732 1056 aa18.79■□□□□ 0.6
SMG1-203ENST00000532700 NRLP54845 237 aa18.79■□□□□ 0.6
SMG1-203ENST00000532700 STX17P56962 302 aa18.79■□□□□ 0.6
SMG1-203ENST00000532700 LRRC63Q05C16 580 aa18.79■□□□□ 0.6
SMG1-203ENST00000532700 SIM2Q14190 667 aaPredicted RBP18.79■□□□□ 0.6
SMG1-203ENST00000532700 EMC10Q5UCC4 262 aa18.79■□□□□ 0.6
SMG1-203ENST00000532700 WDR5BQ86VZ2 330 aa18.79■□□□□ 0.6
SMG1-203ENST00000532700 USP33Q8TEY7 942 aa18.79■□□□□ 0.6
SMG1-203ENST00000532700 NDRG1Q92597 394 aaKnown RBP18.79■□□□□ 0.6
SMG1-203ENST00000532700 HEXIM2Q96MH2 286 aaKnown RBP18.79■□□□□ 0.6
SMG1-203ENST00000532700 MED15Q96RN5 788 aa18.79■□□□□ 0.6
SMG1-203ENST00000532700 DUSP16Q9BY84 665 aa18.79■□□□□ 0.6
SMG1-203ENST00000532700 COMMD8Q9NX08 183 aa18.79■□□□□ 0.6
SMG1-203ENST00000532700 HCN2Q9UL51 889 aa18.79■□□□□ 0.6
SMG1-203ENST00000532700 CTNND2Q9UQB3 1225 aa18.79■□□□□ 0.6
SMG1-203ENST00000532700 E2F8A0AVK6 867 aa18.78■□□□□ 0.6
SMG1-203ENST00000532700 HOXA6P31267 233 aa18.78■□□□□ 0.6
SMG1-203ENST00000532700 CUL2Q13617 745 aa18.78■□□□□ 0.6
SMG1-203ENST00000532700 PPP2R5DQ14738 602 aa18.78■□□□□ 0.6
SMG1-203ENST00000532700 C2orf27AQ580R0 203 aa18.78■□□□□ 0.6
SMG1-203ENST00000532700 CCDC33Q8N5R6 958 aa18.78■□□□□ 0.6
SMG1-203ENST00000532700 FAM160A2Q8N612 972 aaPredicted RBP18.78■□□□□ 0.6
SMG1-203ENST00000532700 NAT16Q8N8M0 369 aa18.78■□□□□ 0.6
SMG1-203ENST00000532700 LMO3Q8TAP4 145 aa18.78■□□□□ 0.6
SMG1-203ENST00000532700 NELFBQ8WX92 580 aa18.78■□□□□ 0.6
SMG1-203ENST00000532700 TMEM176AQ96HP8 235 aa18.78■□□□□ 0.6
SMG1-203ENST00000532700 ZSWIM1Q9BR11 485 aa18.78■□□□□ 0.6
SMG1-203ENST00000532700 CYLDQ9NQC7 956 aa18.78■□□□□ 0.6
SMG1-203ENST00000532700 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.78■□□□□ 0.6
SMG1-203ENST00000532700 ARMCX3Q9UH62 379 aaPredicted RBP18.78■□□□□ 0.6
SMG1-203ENST00000532700 DCLK1O15075 740 aa18.77■□□□□ 0.6
SMG1-203ENST00000532700 ADH5P11766 374 aa18.77■□□□□ 0.6
SMG1-203ENST00000532700 ID4P47928 161 aa18.77■□□□□ 0.6
SMG1-203ENST00000532700 FMO5P49326 533 aa18.77■□□□□ 0.6
SMG1-203ENST00000532700 SPEM2Q0P670 501 aa18.77■□□□□ 0.6
SMG1-203ENST00000532700 DMC1Q14565 340 aa18.77■□□□□ 0.6
SMG1-203ENST00000532700 BHLHA9Q7RTU4 235 aa18.77■□□□□ 0.6
SMG1-203ENST00000532700 KBTBD6Q86V97 674 aa18.77■□□□□ 0.6
SMG1-203ENST00000532700 TMEM25Q86YD3 366 aa18.77■□□□□ 0.6
SMG1-203ENST00000532700 ETFBKMTQ8IXQ9 262 aa18.77■□□□□ 0.6
SMG1-203ENST00000532700 ELOA2Q8IYF1 753 aaPredicted RBP18.77■□□□□ 0.6
SMG1-203ENST00000532700 DHTKD1Q96HY7 919 aaPredicted RBP18.77■□□□□ 0.6
SMG1-203ENST00000532700 FBXO44Q9H4M3 255 aa18.77■□□□□ 0.6
SMG1-203ENST00000532700 TLR8Q9NR97 1041 aaKnown RBP18.77■□□□□ 0.6
SMG1-203ENST00000532700 HOOK1Q9UJC3 728 aaKnown RBP18.77■□□□□ 0.6
SMG1-203ENST00000532700 USP3Q9Y6I4 520 aa18.77■□□□□ 0.6
SMG1-203ENST00000532700 RALGAPA1Q6GYQ0 2036 aa18.77■□□□□ 0.6
SMG1-203ENST00000532700 RNF225M0QZC1 329 aaPredicted RBP18.76■□□□□ 0.59
SMG1-203ENST00000532700 PSMA7O14818 248 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 GABBR2O75899 941 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 RARGP13631 454 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 AMPD2Q01433 879 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 NR1H3Q13133 447 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 CCDC6Q16204 474 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 GOLGA7BQ2TAP0 167 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 ARHGAP17Q68EM7 881 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 TMEM92Q6UXU6 159 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 SYT13Q7L8C5 426 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 PIGZQ86VD9 579 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 ARHGEF19Q8IW93 802 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 CCDC150Q8NCX0 1101 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 TFAP2BQ92481 460 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 PNPLA8Q9NP80 782 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 SLC8A2Q9UPR5 921 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 SH3BP1Q9Y3L3 701 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.76■□□□□ 0.59
SMG1-203ENST00000532700 SPAG17Q6Q759 2223 aa18.76■□□□□ 0.59
SMG1-203ENST00000532700 STX10O60499 249 aa18.75■□□□□ 0.59
SMG1-203ENST00000532700 KLKB1P03952 638 aa18.75■□□□□ 0.59
SMG1-203ENST00000532700 FBXO43Q4G163 708 aa18.75■□□□□ 0.59
SMG1-203ENST00000532700 RAB41Q5JT25 222 aa18.75■□□□□ 0.59
SMG1-203ENST00000532700 LAIR1Q6GTX8 287 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms