RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 PAQR9Q6ZVX9 377 aa18.19■□□□□ 0.5
CTSB-226ENST00000532656 UNC13DQ70J99 1090 aa18.19■□□□□ 0.5
CTSB-226ENST00000532656 SYT12Q8IV01 421 aa18.19■□□□□ 0.5
CTSB-226ENST00000532656 BBS7Q8IWZ6 715 aa18.19■□□□□ 0.5
CTSB-226ENST00000532656 ETFBKMTQ8IXQ9 262 aa18.19■□□□□ 0.5
CTSB-226ENST00000532656 PLEKHO2Q8TD55 490 aa18.19■□□□□ 0.5
CTSB-226ENST00000532656 WBP2Q969T9 261 aa18.19■□□□□ 0.5
CTSB-226ENST00000532656 OTUB2Q96DC9 234 aa18.19■□□□□ 0.5
CTSB-226ENST00000532656 SLC39A2Q9NP94 309 aa18.19■□□□□ 0.5
CTSB-226ENST00000532656 DMAP1Q9NPF5 467 aaPredicted RBP18.19■□□□□ 0.5
CTSB-226ENST00000532656 WASF3Q9UPY6 502 aa18.19■□□□□ 0.5
CTSB-226ENST00000532656 PLXND1Q9Y4D7 1925 aa18.19■□□□□ 0.5
CTSB-226ENST00000532656 GON4LQ3T8J9 2241 aa18.18■□□□□ 0.5
CTSB-226ENST00000532656 ASCC3Q8N3C0 2202 aaKnown RBP18.18■□□□□ 0.5
CTSB-226ENST00000532656 HOXC11O43248 304 aaPredicted RBP18.18■□□□□ 0.5
CTSB-226ENST00000532656 EXOC3O60645 756 aa18.18■□□□□ 0.5
CTSB-226ENST00000532656 CUTAO60888 179 aa18.18■□□□□ 0.5
CTSB-226ENST00000532656 TULP3O75386 442 aa18.18■□□□□ 0.5
CTSB-226ENST00000532656 ENGP17813 658 aa18.18■□□□□ 0.5
CTSB-226ENST00000532656 SNRPFP62306 86 aaKnown RBP18.18■□□□□ 0.5
CTSB-226ENST00000532656 LMAN2Q12907 356 aa18.18■□□□□ 0.5
CTSB-226ENST00000532656 ANO4Q32M45 955 aa18.18■□□□□ 0.5
CTSB-226ENST00000532656 LYSMD4Q5XG99 296 aa18.18■□□□□ 0.5
CTSB-226ENST00000532656 TMEM25Q86YD3 366 aa18.18■□□□□ 0.5
CTSB-226ENST00000532656 ZNF513Q8N8E2 541 aaPredicted RBP18.18■□□□□ 0.5
CTSB-226ENST00000532656 SDCBP2Q9H190 292 aa18.18■□□□□ 0.5
CTSB-226ENST00000532656 SPHK2Q9NRA0 654 aa18.18■□□□□ 0.5
CTSB-226ENST00000532656 DEC1Q9P2X7 70 aa18.18■□□□□ 0.5
CTSB-226ENST00000532656 ZMIZ1Q9ULJ6 1067 aa18.18■□□□□ 0.5
CTSB-226ENST00000532656 WDFY3Q8IZQ1 3526 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 TRIM24O15164 1050 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 POLR2DO15514 142 aaKnown RBP18.17■□□□□ 0.5
CTSB-226ENST00000532656 AP1G2O75843 785 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 ITPKAP23677 461 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 WASP42768 502 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 ORC1Q13415 861 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 BYSLQ13895 437 aaKnown RBP18.17■□□□□ 0.5
CTSB-226ENST00000532656 ZNF667Q5HYK9 610 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 C10orf76Q5T2E6 689 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 FOXD4L5Q5VV16 416 aaPredicted RBP18.17■□□□□ 0.5
CTSB-226ENST00000532656 SNX30Q5VWJ9 437 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 ACOT1Q86TX2 421 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 C12orf56Q8IXR9 622 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 DEFB119Q8N690 84 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 TERB1Q8NA31 727 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 FOXD4L4Q8WXT5 416 aaPredicted RBP18.17■□□□□ 0.5
CTSB-226ENST00000532656 SMARCD1Q96GM5 515 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 TNIP3Q96KP6 325 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 ZNF396Q96N95 335 aaPredicted RBP18.17■□□□□ 0.5
CTSB-226ENST00000532656 SCNM1Q9BWG6 230 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 ADAM33Q9BZ11 813 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 NACA2Q9H009 215 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 VRTNQ9H8Y1 702 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 FSCN3Q9NQT6 498 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 KRT82Q9NSB4 513 aa18.17■□□□□ 0.5
CTSB-226ENST00000532656 PI4KAP42356 2102 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 LRRIQ3A6PVS8 624 aaPredicted RBP18.16■□□□□ 0.5
CTSB-226ENST00000532656 YEATS4O95619 227 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 CFIP05156 583 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 CCDC130P13994 396 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 GABRG2P18507 467 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 PGFP49763 221 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 TUBP50607 506 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 NCOA4Q13772 614 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 KNOP1Q1ED39 458 aaKnown RBP18.16■□□□□ 0.5
CTSB-226ENST00000532656 BMT2Q1RMZ1 405 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 KIAA1211LQ6NV74 962 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 TRMT11Q7Z4G4 463 aaKnown RBP18.16■□□□□ 0.5
CTSB-226ENST00000532656 MIB1Q86YT6 1006 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 FUKQ8N0W3 1084 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 ZMIZ2Q8NF64 920 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 PARD3BQ8TEW8 1205 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 ERLEC1Q96DZ1 483 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 IL37Q9NZH6 218 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 CGNQ9P2M7 1197 aaKnown RBP18.16■□□□□ 0.5
CTSB-226ENST00000532656 PILRBQ9UKJ0 227 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 HCN2Q9UL51 889 aa18.16■□□□□ 0.5
CTSB-226ENST00000532656 ADAMTS9Q9P2N4 1935 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 MYH10P35580 1976 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 TLR5O60602 858 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 BEST1O76090 585 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 VNN1O95497 513 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 CENPBP07199 599 aaPredicted RBP18.15■□□□□ 0.5
CTSB-226ENST00000532656 ZDHHC11BP0C7U3 371 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 HOXB2P14652 356 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 AFMP43652 599 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 RPL6Q02878 288 aaKnown RBP18.15■□□□□ 0.5
CTSB-226ENST00000532656 CUL4BQ13620 913 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 FOXD4L6Q3SYB3 417 aaPredicted RBP18.15■□□□□ 0.5
CTSB-226ENST00000532656 PREPLQ4J6C6 727 aaPredicted RBP18.15■□□□□ 0.5
CTSB-226ENST00000532656 SPDYCQ5MJ68 293 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 SLC23A3Q6PIS1 610 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 FOXD4L3Q6VB84 417 aaPredicted RBP18.15■□□□□ 0.5
CTSB-226ENST00000532656 GRAMD1CQ8IYS0 662 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 SMOQ99835 787 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 TMEM121BQ9BXQ6 578 aaPredicted RBP18.15■□□□□ 0.5
CTSB-226ENST00000532656 MAGEF1Q9HAY2 307 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 DNAJC17Q9NVM6 304 aaKnown RBP18.15■□□□□ 0.5
CTSB-226ENST00000532656 CALCOCO1Q9P1Z2 691 aa18.15■□□□□ 0.5
CTSB-226ENST00000532656 HMGXB4Q9UGU5 601 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms