RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 COILP38432 576 aaPredicted RBP15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 CENPPQ6IPU0 288 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 FAM9CQ8IZT9 166 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 MYCBPQ99417 103 aaPredicted RBP15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 DTNAQ9Y4J8 743 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 PSMA3P25788 255 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 CTCFP49711 727 aaPredicted RBP15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 AP1ARQ63HQ0 302 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 CXCL17Q6UXB2 119 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 ZFP42Q96MM3 310 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 TMEM51Q9NW97 253 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 RRN3Q9NYV6 651 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 LGALS2P05162 132 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 CCDC130P13994 396 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 TGM2P21980 687 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 AXLP30530 894 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 RHOAP61586 193 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 PREPLQ4J6C6 727 aaPredicted RBP15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 RETSATQ6NUM9 610 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 ERAP2Q6P179 960 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 POTEAQ6S8J7 498 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 NUP93Q8N1F7 819 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 PDLIM2Q96JY6 352 aa15.28■□□□□ 0.04
PCDHA9-202ENST00000532602 NDST1P52848 882 aa15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 KDSRQ06136 332 aa15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 MROH9Q5TGP6 573 aa15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 TMCO5AQ8N6Q1 288 aa15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 FBXO44Q9H4M3 255 aa15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 NPHS2Q9NP85 383 aa15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 OSGEPQ9NPF4 335 aa15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 TLR8Q9NR97 1041 aaKnown RBP15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 H2AFY2Q9P0M6 372 aaPredicted RBP15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 HPSEQ9Y251 543 aa15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 PCDHB5Q9Y5E4 795 aa15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 PPP1R37O75864 691 aa15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 BST2Q10589 180 aaKnown RBP15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 BTG3Q14201 252 aaPredicted RBP15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 FKBP1CQ5VVH2 108 aa15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 SLC13A5Q86YT5 568 aaPredicted RBP15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 CCDC126Q96EE4 140 aa15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 DRG1Q9Y295 367 aaKnown RBP15.27■□□□□ 0.04
PCDHA9-202ENST00000532602 TRPC5OSA6NMA1 111 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 MAP3K13O43283 966 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 CALCAP01258 141 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 CKBP12277 381 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 GZMAP12544 262 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 INHBEP58166 350 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 GJC2Q5T442 439 aaPredicted RBP15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 CNPY3Q9BT09 278 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 UBE2OQ9C0C9 1292 aaKnown RBP15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 WDR41Q9HAD4 459 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 NEURL4Q96JN8 1562 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 C16orf96A6NNT2 1141 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 CRTAMO95727 393 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 PTPN7P35236 360 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 KYNUQ16719 465 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 CLEC16AQ2KHT3 1053 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 TJAP1Q5JTD0 557 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 USP38Q8NB14 1042 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 NLGN2Q8NFZ4 835 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 SHCBP1LQ9BZQ2 653 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 COPS7BQ9H9Q2 264 aaPredicted RBP15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 ANKRD63C9JTQ0 380 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 AMHP03971 560 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 CHN1P15882 459 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 GRK3P35626 688 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 SLC12A3P55017 1021 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 OVOS1Q6IE37 1185 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 ZSWIM1Q9BR11 485 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 CIPCQ9C0C6 399 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 NMRK2Q9NPI5 230 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 BLOC1S6Q9UL45 172 aa15.27■□□□□ 0.03
PCDHA9-202ENST00000532602 SOAT1P35610 550 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 ST3GAL1Q11201 340 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 CAMK2GQ13555 558 aaPredicted RBP15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 AGBL2Q5U5Z8 902 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 ADAM32Q8TC27 787 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 KCNV2Q8TDN2 545 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 APOL2Q9BQE5 337 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 ADGRE3Q9BY15 652 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 LNPEPQ9UIQ6 1025 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 ENO1P06733 434 aaKnown RBP15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 MAPTP10636 758 aaKnown RBP15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 ENO3P13929 434 aaPredicted RBP15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 SV2AQ7L0J3 742 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 CEP41Q9BYV8 373 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 CLPBQ9H078 707 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 RPS6KL1Q9Y6S9 549 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 NCAM2O15394 837 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 MICAL2O94851 1124 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 ACADMP11310 421 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 ATXN3P54252 364 aaPredicted RBP15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 CCDC60Q8IWA6 550 aaPredicted RBP15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 TMA16Q96EY4 203 aaKnown RBP15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 UBP1Q9NZI7 540 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 PLAGL2Q9UPG8 496 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 MTO1Q9Y2Z2 717 aaKnown RBP15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 NR2E3Q9Y5X4 410 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms