RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 ATXN3P54252 364 aaPredicted RBP16.1■□□□□ 0.17
BRPF3-210ENST00000532538 GOLGA8FQ08AF8 430 aa16.1■□□□□ 0.17
BRPF3-210ENST00000532538 GOLGA8DPQ0D2H9 430 aa16.1■□□□□ 0.17
BRPF3-210ENST00000532538 ORC1Q13415 861 aa16.1■□□□□ 0.17
BRPF3-210ENST00000532538 CUL4BQ13620 913 aa16.1■□□□□ 0.17
BRPF3-210ENST00000532538 NCOA4Q13772 614 aa16.1■□□□□ 0.17
BRPF3-210ENST00000532538 GAB4Q2WGN9 574 aa16.1■□□□□ 0.17
BRPF3-210ENST00000532538 C10orf76Q5T2E6 689 aa16.1■□□□□ 0.17
BRPF3-210ENST00000532538 SDE2Q6IQ49 451 aa16.1■□□□□ 0.17
BRPF3-210ENST00000532538 ZNF513Q8N8E2 541 aaPredicted RBP16.1■□□□□ 0.17
BRPF3-210ENST00000532538 KIAA1958Q8N8K9 716 aa16.1■□□□□ 0.17
BRPF3-210ENST00000532538 OTUB2Q96DC9 234 aa16.1■□□□□ 0.17
BRPF3-210ENST00000532538 EXOC1Q9NV70 894 aa16.1■□□□□ 0.17
BRPF3-210ENST00000532538 TMEM30AQ9NV96 361 aa16.1■□□□□ 0.17
BRPF3-210ENST00000532538 PVALEFA0A1B0GWK0 134 aa16.09■□□□□ 0.17
BRPF3-210ENST00000532538 CFIP05156 583 aa16.09■□□□□ 0.17
BRPF3-210ENST00000532538 CCDC130P13994 396 aa16.09■□□□□ 0.17
BRPF3-210ENST00000532538 HNRNPLP14866 589 aaKnown RBP eCLIP16.09■□□□□ 0.17
BRPF3-210ENST00000532538 WASP42768 502 aa16.09■□□□□ 0.17
BRPF3-210ENST00000532538 LMAN2Q12907 356 aa16.09■□□□□ 0.17
BRPF3-210ENST00000532538 CNNM4Q6P4Q7 775 aa16.09■□□□□ 0.17
BRPF3-210ENST00000532538 BBS7Q8IWZ6 715 aa16.09■□□□□ 0.17
BRPF3-210ENST00000532538 GRAMD1CQ8IYS0 662 aa16.09■□□□□ 0.17
BRPF3-210ENST00000532538 DEFB119Q8N690 84 aa16.09■□□□□ 0.17
BRPF3-210ENST00000532538 FRMD1Q8N878 549 aa16.09■□□□□ 0.17
BRPF3-210ENST00000532538 ERLEC1Q96DZ1 483 aa16.09■□□□□ 0.17
BRPF3-210ENST00000532538 XYLT2Q9H1B5 865 aa16.09■□□□□ 0.17
BRPF3-210ENST00000532538 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.09■□□□□ 0.17
BRPF3-210ENST00000532538 TLR8Q9NR97 1041 aaKnown RBP16.09■□□□□ 0.17
BRPF3-210ENST00000532538 SPHK2Q9NRA0 654 aa16.09■□□□□ 0.17
BRPF3-210ENST00000532538 LSM7Q9UK45 103 aaKnown RBP16.09■□□□□ 0.17
BRPF3-210ENST00000532538 ATXN2Q99700 1313 aaKnown RBP16.09■□□□□ 0.17
BRPF3-210ENST00000532538 ASCC3Q8N3C0 2202 aaKnown RBP16.09■□□□□ 0.17
BRPF3-210ENST00000532538 LRRIQ3A6PVS8 624 aaPredicted RBP16.08■□□□□ 0.16
BRPF3-210ENST00000532538 TULP3O75386 442 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 HOXB2P14652 356 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 ADORA2BP29275 332 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 P2RY2P41231 377 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 PIK3CAP42336 1068 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 MAP3K7CLP57077 242 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 SHC2P98077 582 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 RPL6Q02878 288 aaKnown RBP16.08■□□□□ 0.16
BRPF3-210ENST00000532538 MESP2Q0VG99 397 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 SGSM1Q2NKQ1 1148 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 LYSMD4Q5XG99 296 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 CEP135Q66GS9 1140 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 GRAMD4Q6IC98 578 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 TPGS1Q6ZTW0 290 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 C12orf56Q8IXR9 622 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
BRPF3-210ENST00000532538 XPO6Q96QU8 1125 aaKnown RBP16.08■□□□□ 0.16
BRPF3-210ENST00000532538 GTPBP2Q9BX10 602 aaKnown RBP16.08■□□□□ 0.16
BRPF3-210ENST00000532538 FBXO44Q9H4M3 255 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 SLC32A1Q9H598 525 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 FAM49BQ9NUQ9 324 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 DNAJC17Q9NVM6 304 aaKnown RBP16.08■□□□□ 0.16
BRPF3-210ENST00000532538 SERTAD1Q9UHV2 236 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 PCDHA7Q9UN72 937 aa16.08■□□□□ 0.16
BRPF3-210ENST00000532538 NEDD8-MDP1E9PL57 170 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 AP5Z1O43299 807 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 TLR5O60602 858 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 KIF20AO95235 890 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 CEACAM1P13688 526 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 DPP6P42658 865 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 KIR2DL1P43626 348 aaPredicted RBP16.07■□□□□ 0.16
BRPF3-210ENST00000532538 BMT2Q1RMZ1 405 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 SYT12Q8IV01 421 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 HSCBQ8IWL3 235 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 HDDC3Q8N4P3 179 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 SPRYD3Q8NCJ5 442 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 DEFB124Q8NES8 71 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 OLIG1Q8TAK6 271 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 SLC2A14Q8TDB8 520 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 PARD3BQ8TEW8 1205 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 BBS2Q9BXC9 721 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 IMPG2Q9BZV3 1241 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 DNAI2Q9GZS0 605 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 COMMD8Q9NX08 183 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 CFAP45Q9UL16 551 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 FRMD4BQ9Y2L6 1034 aa16.07■□□□□ 0.16
BRPF3-210ENST00000532538 TNFRSF10BO14763 440 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 ADAM23O75077 832 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 F13A1P00488 732 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 C4BPAP04003 597 aaKnown RBP16.06■□□□□ 0.16
BRPF3-210ENST00000532538 FAM200BP0CF97 657 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 ZSCAN22P10073 491 aaPredicted RBP16.06■□□□□ 0.16
BRPF3-210ENST00000532538 SPINK2P20155 84 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 ATP5C1P36542 298 aaKnown RBP16.06■□□□□ 0.16
BRPF3-210ENST00000532538 PTGER3P43115 390 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 TUBP50607 506 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 NDST1P52848 882 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 SLC36A4Q6YBV0 504 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 TMEM25Q86YD3 366 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 CHPFQ8IZ52 775 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 FUKQ8N0W3 1084 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 TERB1Q8NA31 727 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 PLEKHO2Q8TD55 490 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 CCDC47Q96A33 483 aaKnown RBP16.06■□□□□ 0.16
BRPF3-210ENST00000532538 SDCBP2Q9H190 292 aa16.06■□□□□ 0.16
BRPF3-210ENST00000532538 MMRN2Q9H8L6 949 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms