RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 PXDC1Q5TGL8 231 aa4□□□□□ -1.77
ATM-217ENST00000531957 MEX3CQ5U5Q3 659 aaKnown RBP4□□□□□ -1.77
ATM-217ENST00000531957 AWAT2Q6E213 333 aa4□□□□□ -1.77
ATM-217ENST00000531957 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
ATM-217ENST00000531957 CXorf57Q6NSI4 855 aaKnown RBP4□□□□□ -1.77
ATM-217ENST00000531957 ZNF517Q6ZMY9 492 aaPredicted RBP4□□□□□ -1.77
ATM-217ENST00000531957 CHPFQ8IZ52 775 aa4□□□□□ -1.77
ATM-217ENST00000531957 METTL25Q8N6Q8 603 aa4□□□□□ -1.77
ATM-217ENST00000531957 C11orf44Q8N8P7 122 aa4□□□□□ -1.77
ATM-217ENST00000531957 NRACQ8N912 160 aa4□□□□□ -1.77
ATM-217ENST00000531957 SPATA3Q8NHX4 192 aa4□□□□□ -1.77
ATM-217ENST00000531957 OSR1Q8TAX0 266 aaPredicted RBP4□□□□□ -1.77
ATM-217ENST00000531957 PNISRQ8TF01 805 aaKnown RBP4□□□□□ -1.77
ATM-217ENST00000531957 WACQ9BTA9 647 aa4□□□□□ -1.77
ATM-217ENST00000531957 AFF4Q9UHB7 1163 aaKnown RBP4□□□□□ -1.77
ATM-217ENST00000531957 MID2Q9UJV3 735 aa4□□□□□ -1.77
ATM-217ENST00000531957 ASAP1Q9ULH1 1129 aa4□□□□□ -1.77
ATM-217ENST00000531957 L1RE1Q9UN81 338 aa4□□□□□ -1.77
ATM-217ENST00000531957 BTBD19C9JJ37 291 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 CCP110O43303 1012 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 NTN1O95631 604 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 MAP4K4O95819 1239 aaPredicted RBP3.99□□□□□ -1.77
ATM-217ENST00000531957 A1BGP04217 495 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 IL1R1P14778 569 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 YY1P25490 414 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 MCM5P33992 734 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 PLCD1P51178 756 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 TIAL1Q01085 375 aaKnown RBP eCLIP3.99□□□□□ -1.77
ATM-217ENST00000531957 DEUP1Q05D60 604 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 ARHGEF7Q14155 803 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 KCNAB1Q14722 419 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 LARS2Q15031 903 aaKnown RBP3.99□□□□□ -1.77
ATM-217ENST00000531957 NPY5RQ15761 445 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 ZNF750Q32MQ0 723 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 MINDY4Q4G0A6 757 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 DCDC5Q6ZRR9 648 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 FAM156AQ8NDB6 213 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 MAP4K1Q92918 833 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 NMD3Q96D46 503 aaKnown RBP3.99□□□□□ -1.77
ATM-217ENST00000531957 HS6ST2Q96MM7 605 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 SNX15Q9NRS6 342 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 C1orf112Q9NSG2 853 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 MTMR4Q9NYA4 1195 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 COL20A1Q9P218 1284 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 MGAT4CQ9UBM8 478 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 RIMKLBQ9ULI2 386 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 CACNA1IQ9P0X4 2223 aa3.99□□□□□ -1.77
ATM-217ENST00000531957 ISM1B1AKI9 464 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 RNF8O76064 485 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 PARP1P09874 1014 aaKnown RBP3.98□□□□□ -1.77
ATM-217ENST00000531957 ACVR2AP27037 513 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 CCKBRP32239 447 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 CPT1AP50416 773 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 GATMP50440 423 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 FOXG1P55316 489 aaPredicted RBP3.98□□□□□ -1.77
ATM-217ENST00000531957 FMO1Q01740 532 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 GHRHRQ02643 423 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 ZNF91Q05481 1191 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 SLC29A2Q14542 456 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 KCNB1Q14721 858 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 RBMS2Q15434 407 aaKnown RBP3.98□□□□□ -1.77
ATM-217ENST00000531957 NFE2Q16621 373 aaPredicted RBP3.98□□□□□ -1.77
ATM-217ENST00000531957 TRIM71Q2Q1W2 868 aaKnown RBP3.98□□□□□ -1.77
ATM-217ENST00000531957 RNF220Q5VTB9 566 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 CCDC149Q6ZUS6 474 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 IRF2BP2Q7Z5L9 587 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 SESTD1Q86VW0 696 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 RAB11FIP4Q86YS3 637 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 LINC01465Q8N7H1 131 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 MAGEB6Q8N7X4 407 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 HMCESQ96FZ2 354 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 FAM204AQ9H8W3 233 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 AS3MTQ9HBK9 375 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 TMEM184CQ9NVA4 438 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 ITGB1BP2Q9UKP3 347 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 OGDHLQ9ULD0 1010 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 EID1Q9Y6B2 187 aa3.98□□□□□ -1.77
ATM-217ENST00000531957 M0R3H8 397 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 SOCS2O14508 198 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 FRS3O43559 492 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 TMPRSS11DO60235 418 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 FGBP02675 491 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 S100BP04271 92 aaPredicted RBP3.97□□□□□ -1.77
ATM-217ENST00000531957 TXNP10599 105 aaKnown RBP3.97□□□□□ -1.77
ATM-217ENST00000531957 PHKG2P15735 406 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 ATF7P17544 494 aaPredicted RBP3.97□□□□□ -1.77
ATM-217ENST00000531957 POLGP54098 1239 aaPredicted RBP3.97□□□□□ -1.77
ATM-217ENST00000531957 YPEL5P62699 121 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 LAMB3Q13751 1172 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 MFSD13AQ14CX5 517 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 TMTC4Q5T4D3 741 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 DENND2CQ68D51 928 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 RANBP10Q6VN20 620 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 USP49Q70CQ1 688 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 TCEAL8Q8IYN2 117 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 ZNF398Q8TD17 642 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 JDP2Q8WYK2 163 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 LRTOMTQ8WZ04 291 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 CUL5Q93034 780 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms