RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 WDR72Q3MJ13 1102 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 WDR45BQ5MNZ6 344 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 GRAMD4Q6IC98 578 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 TRAPPC11Q7Z392 1133 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 LIMS2Q7Z4I7 341 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 C12orf40Q86WS4 652 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 CHCHD4Q8N4Q1 142 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 DEFB119Q8N690 84 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 FRMD1Q8N878 549 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 TERB1Q8NA31 727 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 B3GALNT2Q8NCR0 500 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 OR5B17Q8NGF7 314 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 FOXJ1Q92949 421 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 MED10Q9BTT4 135 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 ZDHHC4Q9NPG8 344 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 SPHK2Q9NRA0 654 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 HSPBP1Q9NZL4 362 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 LSM7Q9UK45 103 aaKnown RBP12.27□□□□□ -0.45
CMTM1-215ENST00000531885 SRPRBQ9Y5M8 271 aaKnown RBP12.27□□□□□ -0.45
CMTM1-215ENST00000531885 LOC400499M0QZD8 3231 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 CEP192Q8TEP8 1941 aa12.27□□□□□ -0.45
CMTM1-215ENST00000531885 COCHO43405 550 aa12.26□□□□□ -0.45
CMTM1-215ENST00000531885 PHACTR2O75167 634 aa12.26□□□□□ -0.45
CMTM1-215ENST00000531885 TULP3O75386 442 aa12.26□□□□□ -0.45
CMTM1-215ENST00000531885 GABRG2P18507 467 aa12.26□□□□□ -0.45
CMTM1-215ENST00000531885 TUBP50607 506 aa12.26□□□□□ -0.45
CMTM1-215ENST00000531885 TRIP6Q15654 476 aaKnown RBP12.26□□□□□ -0.45
CMTM1-215ENST00000531885 CBWD2Q8IUF1 395 aa12.26□□□□□ -0.45
CMTM1-215ENST00000531885 SFTPA1Q8IWL2 248 aa12.26□□□□□ -0.45
CMTM1-215ENST00000531885 SYAP1Q96A49 352 aaPredicted RBP12.26□□□□□ -0.45
CMTM1-215ENST00000531885 FAM84AQ96KN4 292 aa12.26□□□□□ -0.45
CMTM1-215ENST00000531885 TNIP3Q96KP6 325 aa12.26□□□□□ -0.45
CMTM1-215ENST00000531885 HSPA12BQ96MM6 686 aa12.26□□□□□ -0.45
CMTM1-215ENST00000531885 MRPL45Q9BRJ2 306 aaKnown RBP12.26□□□□□ -0.45
CMTM1-215ENST00000531885 ZDHHC5Q9C0B5 715 aa12.26□□□□□ -0.45
CMTM1-215ENST00000531885 ZNF518BQ9C0D4 1074 aa12.26□□□□□ -0.45
CMTM1-215ENST00000531885 CAPN10Q9HC96 672 aa12.26□□□□□ -0.45
CMTM1-215ENST00000531885 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.26□□□□□ -0.459e-12■■■■■ 149.1
CMTM1-215ENST00000531885 DNAJC17Q9NVM6 304 aaKnown RBP12.26□□□□□ -0.45
CMTM1-215ENST00000531885 DNAAF2Q9NVR5 837 aaKnown RBP12.26□□□□□ -0.45
CMTM1-215ENST00000531885 CYP8B1Q9UNU6 501 aa12.26□□□□□ -0.45
CMTM1-215ENST00000531885 APOBEC2Q9Y235 224 aaKnown RBP12.26□□□□□ -0.45
CMTM1-215ENST00000531885 ADAMTS9Q9P2N4 1935 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 FRMD3A2A2Y4 597 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 ANTXRLA6NF34 631 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 IRF1P10914 325 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 HOXB3P14651 431 aaPredicted RBP12.25□□□□□ -0.45
CMTM1-215ENST00000531885 ATICP31939 592 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 WASP42768 502 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 AMPD3Q01432 767 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 STARD3Q14849 445 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 E2F5Q15329 346 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 SNRNP35Q16560 246 aaKnown RBP12.25□□□□□ -0.45
CMTM1-215ENST00000531885 USP49Q70CQ1 688 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 RAB44Q7Z6P3 723 aaPredicted RBP12.25□□□□□ -0.45
CMTM1-215ENST00000531885 PROSER1Q86XN7 944 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 ETFBKMTQ8IXQ9 262 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 TRIML1Q8N9V2 468 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 RDH13Q8NBN7 331 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 IPO4Q8TEX9 1081 aaKnown RBP12.25□□□□□ -0.45
CMTM1-215ENST00000531885 SMARCD1Q96GM5 515 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 CGRRF1Q99675 332 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 DUSP9Q99956 384 aaKnown RBP12.25□□□□□ -0.45
CMTM1-215ENST00000531885 DMAP1Q9NPF5 467 aaPredicted RBP12.25□□□□□ -0.45
CMTM1-215ENST00000531885 FSCN3Q9NQT6 498 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 COMMD8Q9NX08 183 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 WDR35Q9P2L0 1181 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 NXF1Q9UBU9 619 aaKnown RBP12.25□□□□□ -0.45
CMTM1-215ENST00000531885 STARD13Q9Y3M8 1113 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 CLIC4Q9Y696 253 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 PTPRJQ12913 1337 aa12.25□□□□□ -0.45
CMTM1-215ENST00000531885 IGHV1OR15-9A0A0B4J2B8 117 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 FAM221BA6H8Z2 402 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 EIF4E1BA6NMX2 242 aaKnown RBP12.24□□□□□ -0.45
CMTM1-215ENST00000531885 MEI4A8MW99 385 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 NEDD8-MDP1E9PL57 170 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 CLDN5O00501 218 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 EIF3DO15371 548 aaKnown RBP eCLIP12.24□□□□□ -0.45
CMTM1-215ENST00000531885 P4HA1P13674 534 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 SLC5A3P53794 718 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 MESP2Q0VG99 397 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 KIAA1324Q6UXG2 1013 aaKnown RBP12.24□□□□□ -0.45
CMTM1-215ENST00000531885 NAXDQ8IW45 347 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 BBS7Q8IWZ6 715 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 PHTF2Q8N3S3 785 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 CCDC127Q96BQ5 260 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 BBS2Q9BXC9 721 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 PANK2Q9BZ23 570 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 FBXO44Q9H4M3 255 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 CCDC86Q9H6F5 360 aaKnown RBP12.24□□□□□ -0.45
CMTM1-215ENST00000531885 TLR8Q9NR97 1041 aaKnown RBP12.24□□□□□ -0.45
CMTM1-215ENST00000531885 CHORDC1Q9UHD1 332 aaPredicted RBP12.24□□□□□ -0.45
CMTM1-215ENST00000531885 FBXO2Q9UK22 296 aaPredicted RBP12.24□□□□□ -0.45
CMTM1-215ENST00000531885 ITPR1Q14643 2758 aa12.24□□□□□ -0.45
CMTM1-215ENST00000531885 GFRA2O00451 464 aa12.23□□□□□ -0.45
CMTM1-215ENST00000531885 SH3BP5O60239 455 aa12.23□□□□□ -0.45
CMTM1-215ENST00000531885 TLR5O60602 858 aa12.23□□□□□ -0.45
CMTM1-215ENST00000531885 STAU1O95793 577 aaKnown RBP12.23□□□□□ -0.45
CMTM1-215ENST00000531885 FTH1P19P0C7X4 201 aa12.23□□□□□ -0.45
CMTM1-215ENST00000531885 CD59P13987 128 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms