RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 CD6P30203 668 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 PSMC1P62191 440 aaKnown RBP8.31□□□□□ -1.08
NXF1-212ENST00000531872 TAF10Q12962 218 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 POSTNQ15063 836 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 MAPRE1Q15691 268 aaKnown RBP8.31□□□□□ -1.08
NXF1-212ENST00000531872 IL27RAQ6UWB1 636 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 TMEM25Q86YD3 366 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 BRSK2Q8IWQ3 736 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 CHPFQ8IZ52 775 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 RHBDD1Q8TEB9 315 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 CACTINQ8WUQ7 758 aaKnown RBP8.31□□□□□ -1.08
NXF1-212ENST00000531872 KBTBD7Q8WVZ9 684 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 POMGNT1Q8WZA1 660 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 PCED1BQ96HM7 432 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 CDK5RAP3Q96JB5 506 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 C8orf48Q96LL4 319 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 SLC6A17Q9H1V8 727 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 IKZF4Q9H2S9 585 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 GAREM1Q9H706 876 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 SPHK2Q9NRA0 654 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 BLOC1S4Q9NUP1 217 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 WSB2Q9NYS7 404 aaPredicted RBP8.31□□□□□ -1.08
NXF1-212ENST00000531872 SIX4Q9UIU6 781 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 FNDC3AQ9Y2H6 1198 aaKnown RBP8.31□□□□□ -1.08
NXF1-212ENST00000531872 RAI2Q9Y5P3 530 aa8.31□□□□□ -1.08
NXF1-212ENST00000531872 KNTC1P50748 2209 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 CABIN1Q9Y6J0 2220 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 PTPRQQ9UMZ3 2332 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 F8VP50 259 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 GFRA2O00451 464 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 COCHO43405 550 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 PPP1R37O75864 691 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 ABL1P00519 1130 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 NCAM1P13591 858 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 ITPKBP27987 946 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 MATKP42679 507 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 NEK4P51957 841 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 HMGN5P82970 282 aaKnown RBP8.3□□□□□ -1.08
NXF1-212ENST00000531872 RBP5P82980 135 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 CYP27A1Q02318 531 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 PTPRNQ16849 979 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 HLA-BQ31612 363 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 SNX30Q5VWJ9 437 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 TDRD10Q5VZ19 366 aaKnown RBP8.3□□□□□ -1.08
NXF1-212ENST00000531872 GRAMD4Q6IC98 578 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 SDE2Q6IQ49 451 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 ZNF720Q7Z2F6 126 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 ZNF605Q86T29 641 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 CCDC83Q8IWF9 413 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 BBS7Q8IWZ6 715 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 ZNF843Q8N446 348 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 ZCCHC9Q8N567 271 aaKnown RBP8.3□□□□□ -1.08
NXF1-212ENST00000531872 CSGALNACT2Q8N6G5 542 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 SPRYD3Q8NCJ5 442 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 ZSWIM2Q8NEG5 633 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 CADM4Q8NFZ8 388 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 C1orf216Q8TAB5 229 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 PIP4K2CQ8TBX8 421 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 MYCBPAPQ8TBZ2 947 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 OVCA2Q8WZ82 227 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 HVCN1Q96D96 273 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 TOE1Q96GM8 510 aaKnown RBP8.3□□□□□ -1.08
NXF1-212ENST00000531872 FAM84AQ96KN4 292 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 SLITRK1Q96PX8 696 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 KIF2CQ99661 725 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 STRA6Q9BX79 667 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 PRDM16Q9HAZ2 1276 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 ITM2CQ9NQX7 267 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 TMEM30AQ9NV96 361 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 USP36Q9P275 1121 aaKnown RBP8.3□□□□□ -1.08
NXF1-212ENST00000531872 BTBD3Q9Y2F9 522 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 RAD54BQ9Y620 910 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 KNL1Q8NG31 2342 aa8.3□□□□□ -1.08
NXF1-212ENST00000531872 FAM149AA5PLN7 773 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 VWA3AA6NCI4 1184 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 MEI4A8MW99 385 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 PRRT4C9JH25 899 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 BCAT2O15382 392 aaPredicted RBP8.29□□□□□ -1.08
NXF1-212ENST00000531872 TNFSF14O43557 240 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 CACNG3O60359 315 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 TBCAO75347 108 aaKnown RBP8.29□□□□□ -1.08
NXF1-212ENST00000531872 LDHAP00338 332 aaKnown RBP8.29□□□□□ -1.08
NXF1-212ENST00000531872 KRT19P08727 400 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 WARSP23381 471 aaKnown RBP8.29□□□□□ -1.08
NXF1-212ENST00000531872 EIF2S3P41091 472 aaKnown RBP8.29□□□□□ -1.08
NXF1-212ENST00000531872 CACNA2D1P54289 1103 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 DHX8Q14562 1220 aaKnown RBP8.29□□□□□ -1.08
NXF1-212ENST00000531872 MCM6Q14566 821 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 SUZ12Q15022 739 aaKnown RBP8.29□□□□□ -1.08
NXF1-212ENST00000531872 ANO4Q32M45 955 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 DCAF12L1Q5VU92 463 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 ARL6IP4Q66PJ3 421 aaKnown RBP8.29□□□□□ -1.08
NXF1-212ENST00000531872 KIAA1324Q6UXG2 1013 aaKnown RBP8.29□□□□□ -1.08
NXF1-212ENST00000531872 PDZD8Q8NEN9 1154 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 WBP2Q969T9 261 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 ERLEC1Q96DZ1 483 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 AK8Q96MA6 479 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 DCBLD2Q96PD2 775 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 FAM213AQ9BRX8 229 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 GPR174Q9BXC1 333 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms