RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 TBX2Q13207 712 aaPredicted RBP15.21■□□□□ 0.03
CPSF1-206ENST00000531480 TRIM14Q14142 442 aa15.21■□□□□ 0.03
CPSF1-206ENST00000531480 PARM1Q6UWI2 310 aa15.21■□□□□ 0.03
CPSF1-206ENST00000531480 RNF135Q8IUD6 432 aa15.21■□□□□ 0.03
CPSF1-206ENST00000531480 ARID3BQ8IVW6 561 aaPredicted RBP15.21■□□□□ 0.03
CPSF1-206ENST00000531480 KIAA1958Q8N8K9 716 aa15.21■□□□□ 0.03
CPSF1-206ENST00000531480 MAB21L3Q8N8X9 362 aa15.21■□□□□ 0.03
CPSF1-206ENST00000531480 SLC20A1Q8WUM9 679 aa15.21■□□□□ 0.03
CPSF1-206ENST00000531480 E2F7Q96AV8 911 aa15.21■□□□□ 0.03
CPSF1-206ENST00000531480 MRFAP1L1Q96HT8 127 aa15.21■□□□□ 0.03
CPSF1-206ENST00000531480 SLC22A12Q96S37 553 aa15.21■□□□□ 0.03
CPSF1-206ENST00000531480 CPXM1Q96SM3 734 aa15.21■□□□□ 0.03
CPSF1-206ENST00000531480 ULBP1Q9BZM6 244 aa15.21■□□□□ 0.03
CPSF1-206ENST00000531480 NMUR1Q9HB89 426 aa15.21■□□□□ 0.03
CPSF1-206ENST00000531480 LRRC4Q9HBW1 653 aa15.21■□□□□ 0.03
CPSF1-206ENST00000531480 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.21■□□□□ 0.03
CPSF1-206ENST00000531480 LIMD1Q9UGP4 676 aa15.21■□□□□ 0.03
CPSF1-206ENST00000531480 CHORDC1Q9UHD1 332 aaPredicted RBP15.21■□□□□ 0.03
CPSF1-206ENST00000531480 COL4A2P08572 1712 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 GOLGA6L6A8MZA4 724 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 PAPSS1O43252 624 aaPredicted RBP15.2■□□□□ 0.02
CPSF1-206ENST00000531480 PRAMEF12O95522 483 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 USP17L7P0C7H9 530 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 UNGP13051 313 aaPredicted RBP15.2■□□□□ 0.02
CPSF1-206ENST00000531480 RGS7P49802 495 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 IFRD2Q12894 506 aaPredicted RBP15.2■□□□□ 0.02
CPSF1-206ENST00000531480 HECTD3Q5T447 861 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 SFMBT2Q5VUG0 894 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 HGSNATQ68CP4 663 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 TANGO2Q6ICL3 276 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 TRIM72Q6ZMU5 477 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 BEND5Q7L4P6 421 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 SIX6OS1Q8N1H7 587 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 ARHGAP18Q8N392 663 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 TMEM35BQ8NCS4 154 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 C1orf131Q8NDD1 294 aaKnown RBP15.2■□□□□ 0.02
CPSF1-206ENST00000531480 USP13Q92995 863 aaPredicted RBP15.2■□□□□ 0.02
CPSF1-206ENST00000531480 RSPRY1Q96DX4 576 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 TRIM5Q9C035 493 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 RNF38Q9H0F5 515 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 KIF9Q9HAQ2 790 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 ZFP14Q9HCL3 533 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 ARHGAP26Q9UNA1 814 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 NUMBLQ9Y6R0 609 aa15.2■□□□□ 0.02
CPSF1-206ENST00000531480 TRAV19A0A0A6YYK7 116 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 A0A1W2PQH9 124 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 YJEFN3A6XGL0 299 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 E5RJQ4 531 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 E7ENQ6 273 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 COCHO43405 550 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 HDCP19113 662 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 CASP14P31944 242 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 AVPR1AP37288 418 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 ZNF75DP51815 510 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 ZXDBP98169 803 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 CENPCQ03188 943 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 FCHO2Q0JRZ9 810 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 PTPN20Q4JDL3 420 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 TAF3Q5VWG9 929 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 PASD1Q8IV76 773 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 SLC44A3Q8N4M1 653 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 ARL14EPQ8N8R7 260 aaPredicted RBP15.19■□□□□ 0.02
CPSF1-206ENST00000531480 ZNF397Q8NF99 534 aaPredicted RBP15.19■□□□□ 0.02
CPSF1-206ENST00000531480 PPP1R13BQ96KQ4 1090 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 ZFRQ96KR1 1074 aaKnown RBP15.19■□□□□ 0.02
CPSF1-206ENST00000531480 LRRC3BQ96PB8 259 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 NOX5Q96PH1 765 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 CYP2S1Q96SQ9 504 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 CDK5RAP1Q96SZ6 601 aaKnown RBP15.19■□□□□ 0.02
CPSF1-206ENST00000531480 PCDHB18PQ96TA0 734 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 DNAJC7Q99615 494 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 AGPAT1Q99943 283 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 RPP25Q9BUL9 199 aaKnown RBP15.19■□□□□ 0.02
CPSF1-206ENST00000531480 SLITRK6Q9H5Y7 841 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 CCSER2Q9H7U1 834 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 TDP1Q9NUW8 608 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 LUC7L2Q9Y383 392 aaKnown RBP15.19■□□□□ 0.02
CPSF1-206ENST00000531480 CEP83Q9Y592 693 aa15.19■□□□□ 0.02
CPSF1-206ENST00000531480 SART1O43290 800 aaKnown RBP15.18■□□□□ 0.02
CPSF1-206ENST00000531480 TLR5O60602 858 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 LCP1P13796 627 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 SCNN1AP37088 669 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 GSCP56915 257 aaPredicted RBP15.18■□□□□ 0.02
CPSF1-206ENST00000531480 YWHAGP61981 247 aaKnown RBP eCLIP15.18■□□□□ 0.02
CPSF1-206ENST00000531480 ARID5AQ03989 594 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 USP4Q13107 963 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 ASIC2Q16515 512 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 VITQ6UXI7 678 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 ZDHHC17Q8IUH5 632 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 MFSD6LQ8IWD5 586 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 SCUBE3Q8IX30 993 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 DRC7Q8IY82 874 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 CELF5Q8N6W0 485 aaKnown RBP15.18■□□□□ 0.02
CPSF1-206ENST00000531480 CLEC4CQ8WTT0 213 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 DEPDC1BQ8WUY9 529 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 C1QTNF1Q9BXJ1 281 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 PLA2G2FQ9BZM2 168 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 ASNSD1Q9NWL6 643 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 TJP2Q9UDY2 1190 aa15.18■□□□□ 0.02
CPSF1-206ENST00000531480 SORCS3Q9UPU3 1222 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms