RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SH3PXD2AQ5TCZ1 1133 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 ACOT1Q86TX2 421 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 BBS7Q8IWZ6 715 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 TMEFF1Q8IYR6 380 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 WHAMMQ8TF30 809 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 OVCA2Q8WZ82 227 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 MAGEF1Q9HAY2 307 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 KRT82Q9NSB4 513 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 MBD1Q9UIS9 605 aaPredicted RBP19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 SH3BP1Q9Y3L3 701 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 CACNA1EQ15878 2313 aa19.54■□□□□ 0.72
SSSCA1-206ENST00000531405 A0A0A0MRY4 1105 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 TCRBV21S2A2A0A5A6 115 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 MAP3K13O43283 966 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 VNN1O95497 513 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 PTGER3P43115 390 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 TNFRSF4P43489 277 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 PGFP49763 221 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 GAD2Q05329 585 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 ZNF252P-AS1Q0IIN9 211 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 NCOA4Q13772 614 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 UAP1L1Q3KQV9 507 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 LPCAT2Q7L5N7 544 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 FUKQ8N0W3 1084 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 PGBD3Q8N328 593 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 PARD3BQ8TEW8 1205 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 SMARCD1Q96GM5 515 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 SPACA7Q96KW9 195 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 VRTNQ9H8Y1 702 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 POLMQ9NP87 494 aaPredicted RBP19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 DMAP1Q9NPF5 467 aaPredicted RBP19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 TMEM74BQ9NUR3 256 aa19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 CGNQ9P2M7 1197 aaKnown RBP19.53■□□□□ 0.72
SSSCA1-206ENST00000531405 ATXN2Q99700 1313 aaKnown RBP19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 TBC1D3BA6NDS4 549 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 TRIM24O15164 1050 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 AP1G2O75843 785 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 BEST1O76090 585 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 C4BPAP04003 597 aaKnown RBP19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 CCDC130P13994 396 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 DLG4P78352 724 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 FOXC1Q12948 553 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 HSF5Q4G112 596 aaPredicted RBP19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 TRIM61Q5EBN2 209 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 SNX30Q5VWJ9 437 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 TMEM25Q86YD3 366 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 ETFBKMTQ8IXQ9 262 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 ZMIZ2Q8NF64 920 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 TNIP3Q96KP6 325 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 SMOQ99835 787 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 IL37Q9NZH6 218 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 HMGXB4Q9UGU5 601 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 PCDHA7Q9UN72 937 aa19.52■□□□□ 0.72
SSSCA1-206ENST00000531405 PVALEFA0A1B0GWK0 134 aa19.51■□□□□ 0.71
SSSCA1-206ENST00000531405 TULP3O75386 442 aa19.51■□□□□ 0.71
SSSCA1-206ENST00000531405 ZDHHC11BP0C7U3 371 aa19.51■□□□□ 0.71
SSSCA1-206ENST00000531405 SPINK2P20155 84 aa19.51■□□□□ 0.71
SSSCA1-206ENST00000531405 TUBP50607 506 aa19.51■□□□□ 0.71
SSSCA1-206ENST00000531405 ANO4Q32M45 955 aa19.51■□□□□ 0.71
SSSCA1-206ENST00000531405 MAP7D1Q3KQU3 841 aa19.51■□□□□ 0.71
SSSCA1-206ENST00000531405 BTBD8Q5XKL5 378 aa19.51■□□□□ 0.71
SSSCA1-206ENST00000531405 ZNF513Q8N8E2 541 aaPredicted RBP19.51■□□□□ 0.71
SSSCA1-206ENST00000531405 OTUB2Q96DC9 234 aa19.51■□□□□ 0.71
SSSCA1-206ENST00000531405 NACA2Q9H009 215 aa19.51■□□□□ 0.71
SSSCA1-206ENST00000531405 SPHK2Q9NRA0 654 aa19.51■□□□□ 0.71
SSSCA1-206ENST00000531405 HCN2Q9UL51 889 aa19.51■□□□□ 0.71
SSSCA1-206ENST00000531405 PCDH15Q96QU1 1955 aa19.51■□□□□ 0.71
SSSCA1-206ENST00000531405 FAM92AA1XBS5 289 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 C1QTNF9BB2RNN3 333 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 HOXC11O43248 304 aaPredicted RBP19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 KLRC4O43908 158 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 TBX18O95935 607 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 TOP3BO95985 862 aaKnown RBP19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 C1QTNF9P0C862 333 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 WASP42768 502 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 MAPK8P45983 427 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 ME1P48163 572 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 MAP3K7CLP57077 242 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 CLDN10P78369 228 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 STK4Q13043 487 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 C10orf76Q5T2E6 689 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 RESP18Q5W5W9 173 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 MIB1Q86YT6 1006 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 DEFB119Q8N690 84 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 KIAA0895Q8NCT3 520 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 SLC2A14Q8TDB8 520 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 ERLEC1Q96DZ1 483 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.5■□□□□ 0.712e-6■■■■■ 149.1
SSSCA1-206ENST00000531405 FAM49BQ9NUQ9 324 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 FAM13BQ9NYF5 915 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 DEC1Q9P2X7 70 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 SERTAD1Q9UHV2 236 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 DMXL2Q8TDJ6 3036 aa19.5■□□□□ 0.71
SSSCA1-206ENST00000531405 FAM208BQ5VWN6 2430 aa19.49■□□□□ 0.71
SSSCA1-206ENST00000531405 TLR5O60602 858 aa19.49■□□□□ 0.71
SSSCA1-206ENST00000531405 ITPKAP23677 461 aa19.49■□□□□ 0.71
SSSCA1-206ENST00000531405 NDST1P52848 882 aa19.49■□□□□ 0.71
SSSCA1-206ENST00000531405 AP3M2P53677 418 aa19.49■□□□□ 0.71
SSSCA1-206ENST00000531405 SPOPLQ6IQ16 392 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms