RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 CAPN11Q9UMQ6 739 aa16.09■□□□□ 0.17
CCS-206ENST00000530961 ATG2AQ2TAZ0 1938 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 TRAV19A0A0A6YYK7 116 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 SART1O43290 800 aaKnown RBP16.08■□□□□ 0.16
CCS-206ENST00000530961 ECI2O75521 394 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 FBXO21O94952 628 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 CFHP08603 1231 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 USP17L7P0C7H9 530 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 HDCP19113 662 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 CDH5P33151 784 aaPredicted RBP16.08■□□□□ 0.16
CCS-206ENST00000530961 RGS7P49802 495 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 ADIGQ0VDE8 80 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 HTR4Q13639 388 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 TRIM14Q14142 442 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 HECTD3Q5T447 861 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 STXBP5Q5T5C0 1151 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 SFMBT2Q5VUG0 894 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 POTEHQ6S545 545 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 TRIM72Q6ZMU5 477 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 RNF135Q8IUD6 432 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 ARID3BQ8IVW6 561 aaPredicted RBP16.08■□□□□ 0.16
CCS-206ENST00000530961 ZNF276Q8N554 614 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 WDTC1Q8N5D0 677 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 SYN2Q92777 582 aaPredicted RBP16.08■□□□□ 0.16
CCS-206ENST00000530961 ELSPBP1Q96BH3 223 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 ULBP1Q9BZM6 244 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 KCNK12Q9HB15 430 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 TRPC7Q9HCX4 862 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 ST7Q9NRC1 585 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 OBP2AQ9NY56 170 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 CLIC5Q9NZA1 410 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 NOCTQ9UK39 431 aaKnown RBP16.08■□□□□ 0.16
CCS-206ENST00000530961 LUC7L2Q9Y383 392 aaKnown RBP16.08■□□□□ 0.16
CCS-206ENST00000530961 ATRXP46100 2492 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 TRIOO75962 3097 aa16.08■□□□□ 0.16
CCS-206ENST00000530961 TPRP12270 2363 aaKnown RBP16.07■□□□□ 0.16
CCS-206ENST00000530961 MED19A0JLT2 244 aaPredicted RBP16.07■□□□□ 0.16
CCS-206ENST00000530961 LRRC53A6NM62 1247 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 OAS1P00973 400 aaKnown RBP16.07■□□□□ 0.16
CCS-206ENST00000530961 RALAP11233 206 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 LCP1P13796 627 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 ZBED6P86452 979 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 ARID5AQ03989 594 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 PDCLQ13371 301 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 ZNF268Q14587 947 aaPredicted RBP16.07■□□□□ 0.16
CCS-206ENST00000530961 TAF3Q5VWG9 929 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 PARM1Q6UWI2 310 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 ASCL5Q7RTU5 278 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 IRF2BP2Q7Z5L9 587 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 TADA2BQ86TJ2 420 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 VSTM4Q8IW00 320 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 IRGQQ8WZA9 623 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 EDAQ92838 391 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 PPP1R13BQ96KQ4 1090 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 CDK5RAP1Q96SZ6 601 aaKnown RBP16.07■□□□□ 0.16
CCS-206ENST00000530961 NUMBLQ9Y6R0 609 aa16.07■□□□□ 0.16
CCS-206ENST00000530961 A0A1W2PQH9 124 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 C2orf78A6NCI8 922 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 DPYSL4O14531 572 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 GABBR2O75899 941 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 OLFM2O95897 454 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 CKMP06732 381 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 MMEP08473 750 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 SLC7A9P82251 487 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 TDGQ13569 410 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 ASIC2Q16515 512 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 TANGO2Q6ICL3 276 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 KLHDC10Q6PID8 442 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 PASD1Q8IV76 773 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 CELF5Q8N6W0 485 aaKnown RBP16.06■□□□□ 0.16
CCS-206ENST00000530961 ARL14EPQ8N8R7 260 aaPredicted RBP16.06■□□□□ 0.16
CCS-206ENST00000530961 MSANTD4Q8NCY6 345 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 C1orf131Q8NDD1 294 aaKnown RBP16.06■□□□□ 0.16
CCS-206ENST00000530961 FGF14Q92915 247 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 MIS12Q9H081 205 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 KIF9Q9HAQ2 790 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 TDP1Q9NUW8 608 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 CYTH4Q9UIA0 394 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 NAGPAQ9UK23 515 aa16.06■□□□□ 0.16
CCS-206ENST00000530961 BZW2Q9Y6E2 419 aaKnown RBP16.06■□□□□ 0.16
CCS-206ENST00000530961 PLXNA3P51805 1871 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 PRR23AA6NEV1 266 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 TMEM221A6NGB7 291 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 M0R296 226 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 TLR5O60602 858 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 CYP1A1P04798 512 aaPredicted RBP16.05■□□□□ 0.16
CCS-206ENST00000530961 GYPCP04921 128 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 ASGR2P07307 311 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 TPM1P09493 284 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 CHRNB2P17787 502 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 FCARP24071 287 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 PRKCIP41743 596 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 DAOAP59103 153 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 YWHAGP61981 247 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCS-206ENST00000530961 FMO1Q01740 532 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 SCD5Q86SK9 330 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 ZDHHC17Q8IUH5 632 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 SLC44A3Q8N4M1 653 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 FBXL6Q8N531 539 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 IPO4Q8TEX9 1081 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms