RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.93■□□□□ 0.46
BRCA2-204ENST00000530893 SMPD1P17405 629 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 ALDH3A1P30838 453 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 MAGEA6P43360 314 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 PTPN9P43378 593 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 IQSEC1Q6DN90 963 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 NOTUMQ6P988 496 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 NPNTQ6UXI9 565 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 FAM47EQ6ZV65 393 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 ACOT1Q86TX2 421 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 ECHDC2Q86YB7 292 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 RMDN2Q96LZ7 410 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 NGRNQ9NPE2 291 aaKnown RBP17.93■□□□□ 0.46
BRCA2-204ENST00000530893 ATP5HO75947 161 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 CCNB1P14635 433 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 SLC8A1P32418 973 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 ELK3P41970 407 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 RGS7P49802 495 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 GTF2A2P52657 109 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 ATP11AP98196 1134 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 GRB14Q14449 540 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 SETDB1Q15047 1291 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 SLC1A5Q15758 541 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 SEPT7Q16181 437 aaKnown RBP17.92■□□□□ 0.46
BRCA2-204ENST00000530893 SPDYAQ5MJ70 313 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 SCYL2Q6P3W7 929 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 LVRNQ6Q4G3 990 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 DPP9Q86TI2 863 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 OR6J1Q8NGC5 347 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 KHSRPQ92945 711 aaKnown RBP eCLIP17.92■□□□□ 0.46
BRCA2-204ENST00000530893 KLC2Q9H0B6 622 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 VPS11Q9H270 941 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 SNTG2Q9NY99 539 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 CNTN3Q9P232 1028 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 CHMP2BQ9UQN3 213 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 IKBKGQ9Y6K9 419 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 SCN1AP35498 2009 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 TRIP11Q15643 1979 aa17.92■□□□□ 0.46
BRCA2-204ENST00000530893 PIK3R2O00459 728 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 PAPSS1O43252 624 aaPredicted RBP17.91■□□□□ 0.46
BRCA2-204ENST00000530893 GRAP2O75791 330 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 DCTN3O75935 186 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 ZBED1O96006 694 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 NQO1P15559 274 aaKnown RBP17.91■□□□□ 0.46
BRCA2-204ENST00000530893 ZFXP17010 805 aaPredicted RBP17.91■□□□□ 0.46
BRCA2-204ENST00000530893 AXLP30530 894 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 MGAT5Q09328 741 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 KIZQ2M2Z5 673 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 C1orf228Q6PIY5 440 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 ALKAL1Q6UXT8 129 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 CATSPER4Q7RTX7 472 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 PQLC3Q8N755 202 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 BANPQ8N9N5 519 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 ZNF398Q8TD17 642 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 KLHL29Q96CT2 875 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 LRRC39Q96DD0 335 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 MRRFQ96E11 262 aaKnown RBP17.91■□□□□ 0.46
BRCA2-204ENST00000530893 MAML3Q96JK9 1138 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 ZMAT2Q96NC0 199 aaKnown RBP17.91■□□□□ 0.46
BRCA2-204ENST00000530893 SNRNP25Q9BV90 132 aaKnown RBP17.91■□□□□ 0.46
BRCA2-204ENST00000530893 RAB6BQ9NRW1 208 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 GRID1Q9ULK0 1009 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 UBQLN1Q9UMX0 589 aaKnown RBP17.91■□□□□ 0.46
BRCA2-204ENST00000530893 NRCAMQ92823 1304 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 KCNN4O15554 427 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 CD4P01730 458 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 RPL34P49207 117 aaKnown RBP17.91■□□□□ 0.46
BRCA2-204ENST00000530893 GTF2A1P52655 376 aaPredicted RBP17.91■□□□□ 0.46
BRCA2-204ENST00000530893 ZNF200P98182 395 aaPredicted RBP17.91■□□□□ 0.46
BRCA2-204ENST00000530893 EFTUD2Q15029 972 aaKnown RBP eCLIP17.91■□□□□ 0.468e-7■■■■□ 19.8
BRCA2-204ENST00000530893 DPYSL2Q16555 572 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 ASRGL1Q7L266 308 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 SLC26A9Q7LBE3 791 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 GPR142Q7Z601 462 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 ANKRD23Q86SG2 305 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 TBC1D1Q86TI0 1168 aaPredicted RBP17.91■□□□□ 0.46
BRCA2-204ENST00000530893 PCDH19Q8TAB3 1148 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 SLC44A1Q8WWI5 657 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 MS4A4AQ96JQ5 239 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 TINF2Q9BSI4 451 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 SPON1Q9HCB6 807 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 ARHGEF3Q9NR81 526 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 GGT7Q9UJ14 662 aa17.91■□□□□ 0.46
BRCA2-204ENST00000530893 SMIM35A0A1B0GVV1 85 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 TCRBV9S1A1TA0A576 114 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 GPR32O75388 356 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 FAM155BO75949 473 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 ATP6V1G2O95670 118 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 GSTA2P09210 222 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 ALADP13716 330 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 NR2C2P49116 596 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 BCAT1P54687 386 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 HDAC4P56524 1084 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 BST2Q10589 180 aaKnown RBP17.9■□□□□ 0.46
BRCA2-204ENST00000530893 RAB6CQ53S08 254 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 CDKL3Q8IVW4 592 aaPredicted RBP17.9■□□□□ 0.46
BRCA2-204ENST00000530893 SCUBE3Q8IX30 993 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 CRYBG2Q8N1P7 616 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 ANKRD52Q8NB46 1076 aa17.9■□□□□ 0.46
BRCA2-204ENST00000530893 OR6B3Q8NGW1 331 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms