RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 BMXP51813 675 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 COPAP53621 1224 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 ESRRGP62508 458 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 IFITM2Q01629 132 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 CD300CQ08708 224 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 SF3B4Q15427 424 aaKnown RBP eCLIP8.43□□□□□ -1.063e-8■■■□□ 18.4
CSDE1-214ENST00000530886 DGKDQ16760 1214 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 LETM2Q2VYF4 491 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 WDR45BQ5MNZ6 344 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 ATG16L1Q676U5 607 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 PPP4R4Q6NUP7 873 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 DRICH1Q6PGQ1 229 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-214ENST00000530886 LINC00299Q6ZSB3 139 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 TTC30AQ86WT1 665 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 NLRP7Q8WX94 980 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 DLG3Q92796 817 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 OSBPL11Q9BXB4 747 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 ANO3Q9BYT9 981 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 ACSS3Q9H6R3 686 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 CNNM1Q9NRU3 951 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 GPRC5DQ9NZD1 345 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 IRS2Q9Y4H2 1338 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 PRSS51A0A1B0GVH4 220 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 WDR91A4D1P6 747 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 AREL1O15033 823 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 GNPATO15228 680 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 FTLP02792 175 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-214ENST00000530886 BGNP21810 368 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 RPA1P27694 616 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 KRT6CP48668 564 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 GRSF1Q12849 480 aaKnown RBP eCLIP8.43□□□□□ -1.06
CSDE1-214ENST00000530886 ATP1A4Q13733 1029 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 MESDQ14696 234 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 ARHGEF6Q15052 776 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 CALCRLQ16602 461 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 SCARA3Q6AZY7 606 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 ANKRD26P1Q6NSI1 321 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 OLAHQ9NV23 265 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 SIRPGQ9P1W8 387 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 RABL2AQ9UBK7 228 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-214ENST00000530886 SHOC2Q9UQ13 582 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 CPQQ9Y646 472 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 TLL2Q9Y6L7 1015 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 FER1L6Q2WGJ9 1857 aa8.43□□□□□ -1.06
CSDE1-214ENST00000530886 USP17L12C9JPN9 530 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 USP17L21D6R901 530 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 H3BMQ9 156 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 LPXNO60711 386 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 CHEK2O96017 543 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 CYP2D6P10635 497 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 NMT1P30419 496 aaKnown RBP8.42□□□□□ -1.06
CSDE1-214ENST00000530886 SLC25A3Q00325 362 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 HSPA14Q0VDF9 509 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 FAAP100Q0VG06 881 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 PARP10Q53GL7 1025 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 C6orf52Q5T4I8 152 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 CADM3Q8N126 398 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 TBCKQ8TEA7 893 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 KBTBD7Q8WVZ9 684 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 TRIB2Q92519 343 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 TANKQ92844 425 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 APBB2Q92870 758 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 COG8Q96MW5 612 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 ALPK1Q96QP1 1244 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 MKNK1Q9BUB5 465 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 APEX2Q9UBZ4 518 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 STK39Q9UEW8 545 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 BCAP29Q9UHQ4 241 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 PRPF19Q9UMS4 504 aaKnown RBP8.42□□□□□ -1.06
CSDE1-214ENST00000530886 A0A087WXM4 84 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 MYOCOSA0A1B0GUC4 107 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 I3L4J1 428 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 CLOCKO15516 846 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 ATE1O95260 518 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 ZNF26P17031 533 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-214ENST00000530886 ITGAXP20702 1163 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 CYP7A1P22680 504 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 GPX6P59796 221 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 YWHAGP61981 247 aaKnown RBP eCLIP8.42□□□□□ -1.06
CSDE1-214ENST00000530886 SPIRE1Q08AE8 756 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 CBLBQ13191 982 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 TRIM16LQ309B1 348 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 CIAPIN1Q6FI81 312 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 GRAMD2AQ8IUY3 354 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 CHAC2Q8WUX2 184 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 NSUN4Q96CB9 384 aaKnown RBP8.42□□□□□ -1.06
CSDE1-214ENST00000530886 C1orf50Q9BV19 199 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 SIAEQ9HAT2 523 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 GTF3C4Q9UKN8 822 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 DNAJC16Q9Y2G8 782 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 PCDHGA11Q9Y5H2 935 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 XIRP1Q702N8 1843 aaKnown RBP8.42□□□□□ -1.06
CSDE1-214ENST00000530886 M0QX08 132 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 MZF1P28698 734 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-214ENST00000530886 RCVRNP35243 200 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 KPNA1P52294 538 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-214ENST00000530886 TIGD2Q4W5G0 525 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 RALGPS1Q5JS13 557 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 USP43Q70EL4 1123 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 CLVS1Q8IUQ0 354 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms