RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 A0A1W2PQH9 124 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 GRID2IPA4D2P6 1211 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 CCP110O43303 1012 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 BUB1BO60566 1050 aaPredicted RBP11.17□□□□□ -0.62
SOX6-213ENST00000530378 PALMO75781 387 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 FTCDO95954 541 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 LRG1P02750 347 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 GJC1P36383 396 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 RPL34P49207 117 aaKnown RBP11.17□□□□□ -0.62
SOX6-213ENST00000530378 ZNF252P-AS1Q0IIN9 211 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 TAF10Q12962 218 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 ZNF268Q14587 947 aaPredicted RBP11.17□□□□□ -0.62
SOX6-213ENST00000530378 RAB6CQ53S08 254 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 ZNF569Q5MCW4 686 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 BHLHA9Q7RTU4 235 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 GPR65Q8IYL9 337 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 C12orf76Q8N812 135 aaPredicted RBP11.17□□□□□ -0.62
SOX6-213ENST00000530378 VN1R2Q8NFZ6 395 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 TPCN2Q8NHX9 752 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 ADAM32Q8TC27 787 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 MRPL38Q96DV4 380 aaKnown RBP11.17□□□□□ -0.62
SOX6-213ENST00000530378 CFAP57Q96MR6 1250 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 RAB6CQ9H0N0 254 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 NMUR1Q9HB89 426 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 HCFC1R1Q9NWW0 138 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 PACSIN2Q9UNF0 486 aaPredicted RBP11.17□□□□□ -0.62
SOX6-213ENST00000530378 A0A0C4DFX4 3053 aa11.17□□□□□ -0.62
SOX6-213ENST00000530378 LINC01565O15544 149 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 NCK2O43639 380 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 TFE3P19532 575 aaPredicted RBP11.16□□□□□ -0.62
SOX6-213ENST00000530378 PSMA2P25787 234 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 YWHAQP27348 245 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 EPHB3P54753 998 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 SNX16P57768 344 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 GNG11P61952 73 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 PITX1P78337 314 aaPredicted RBP11.16□□□□□ -0.62
SOX6-213ENST00000530378 ATP11AP98196 1134 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 VEPH1Q14D04 833 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 C15orf59Q2T9L4 293 aaPredicted RBP11.16□□□□□ -0.62
SOX6-213ENST00000530378 TCEAL5Q5H9L2 206 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 PPM1LQ5SGD2 360 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 PPP1R15BQ5SWA1 713 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 SH3PXD2AQ5TCZ1 1133 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 DAAM2Q86T65 1068 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 RHOT2Q8IXI1 618 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 HS6ST3Q8IZP7 471 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 DEFB106AQ8N104 65 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 SLC35F6Q8N357 371 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 KHSRPQ92945 711 aaKnown RBP eCLIP11.16□□□□□ -0.62
SOX6-213ENST00000530378 WDR24Q96S15 920 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 LMAN2LQ9H0V9 348 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 ZNF334Q9HCZ1 680 aaPredicted RBP11.16□□□□□ -0.62
SOX6-213ENST00000530378 MRPL47Q9HD33 250 aaKnown RBP11.16□□□□□ -0.62
SOX6-213ENST00000530378 PNPLA8Q9NP80 782 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 CYLDQ9NQC7 956 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 CNGB3Q9NQW8 809 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 OSER1Q9NX31 292 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 WDR35Q9P2L0 1181 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 UVRAGQ9P2Y5 699 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 CDH22Q9UJ99 828 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 NAALADL1Q9UQQ1 740 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 DENND4CQ5VZ89 1909 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 GOLGA6L9A6NEM1 432 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 SIGLEC16A6NMB1 481 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 MDM4O15151 490 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 KIF5CO60282 957 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 FBXO21O94952 628 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 LTFP02788 710 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 TCF4P15884 667 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 PDGFRAP16234 1089 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 IGFBP4P22692 258 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 SSR1P43307 286 aaKnown RBP11.16□□□□□ -0.62
SOX6-213ENST00000530378 YWHAGP61981 247 aaKnown RBP eCLIP11.16□□□□□ -0.62
SOX6-213ENST00000530378 DUSP6Q16828 381 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 DCAF6Q58WW2 860 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 SYPL2Q5VXT5 272 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 EP400NLQ6ZTU2 488 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 CCDC149Q6ZUS6 474 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 SLC26A9Q7LBE3 791 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 SCD5Q86SK9 330 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 RXFP2Q8WXD0 754 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 SPATA17Q96L03 361 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 CORO1BQ9BR76 489 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 ADAM33Q9BZ11 813 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 UBXN6Q9BZV1 441 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 USP3Q9Y6I4 520 aa11.16□□□□□ -0.62
SOX6-213ENST00000530378 NOTCH4Q99466 2003 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 A0A0A6YYK5 440 aaPredicted RBP11.15□□□□□ -0.62
SOX6-213ENST00000530378 A0A1W2PPC1 479 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 TMEM191CA6NGB0 347 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 NRG2O14511 850 aaPredicted RBP11.15□□□□□ -0.62
SOX6-213ENST00000530378 ENC1O14682 589 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 CAPN9O14815 690 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 FANCGO15287 622 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 HSF2BPO75031 334 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 DAB1O75553 588 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 RTN3O95197 1032 aaPredicted RBP11.15□□□□□ -0.62
SOX6-213ENST00000530378 NCAM1P13591 858 aa11.15□□□□□ -0.62
SOX6-213ENST00000530378 HMGA1P17096 107 aaKnown RBP11.15□□□□□ -0.62
SOX6-213ENST00000530378 GJA1P17302 382 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms