RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 LOC102724159A0A0B4J2E5 919 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 KIAA0355O15063 1070 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 HOXA3O43365 443 aaPredicted RBP5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 ZBED4O75132 1171 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 MYBP10242 640 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 RPS19P39019 145 aaKnown RBP5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 GZMKP49863 264 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 FPGSQ05932 587 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 PWP2Q15269 919 aaKnown RBP5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 AAK1Q2M2I8 961 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 SBK1Q52WX2 424 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 FKBP15Q5T1M5 1219 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 AKNAD1Q5T1N1 836 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 SNRNP48Q6IEG0 339 aaKnown RBP5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 Q8TCH9 128 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 HDAC10Q969S8 669 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 LOXL4Q96JB6 756 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 ZNF512Q96ME7 567 aaPredicted RBP5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 NELFAQ9H3P2 528 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 BCO1Q9HAY6 547 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 ANLNQ9NQW6 1124 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 STARD7Q9NQZ5 370 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 NYAP2Q9P242 653 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 ZHX1Q9UKY1 873 aaPredicted RBP5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 RUVBL1Q9Y265 456 aaKnown RBP5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 PCDHB1Q9Y5F3 818 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 EYSQ5T1H1 3165 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 MYH8P13535 1937 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 MROH7Q68CQ1 1323 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 SYNRGQ9UMZ2 1314 aa5.91□□□□□ -1.46
AMBRA1-209ENST00000529963 BAZ2AQ9UIF9 1905 aaKnown RBP5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 PMS2P1A4D2B8 440 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 FAM171A2A8MVW0 826 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 F5H6K3 240 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 SMIM22K7EJ46 135 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 ATP2A1O14983 1001 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 AP1G1O43747 822 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 DUSP11O75319 330 aaKnown RBP5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 ENDOD1O94919 500 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 NDUFB10O96000 172 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 AMY1AP04745 511 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 POU2F2P09086 479 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 GNAT2P19087 354 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 PCSK1P29120 753 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 CRHR1P34998 444 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 WASP42768 502 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 TDO2P48775 406 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 ACLYP53396 1101 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 KLRC3Q07444 240 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 IFIT1BQ5T764 474 aaKnown RBP5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 ZNF585AQ6P3V2 769 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 CCDC174Q6PII3 467 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 MAMDC4Q6UXC1 1216 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 ANKRD33Q7Z3H0 272 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 ZNF444Q8N0Y2 327 aaPredicted RBP5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 CPXCR1Q8N123 301 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 D2HGDHQ8N465 521 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 PCSK9Q8NBP7 692 aaKnown RBP5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 SLC35B2Q8TB61 432 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 MORC4Q8TE76 937 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 GLT1D1Q96MS3 346 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 WWC2-AS2Q96NR7 200 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 STRBPQ96SI9 672 aaKnown RBP5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 NUP88Q99567 741 aaPredicted RBP5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 KCNH6Q9H252 994 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 ECHDC1Q9NTX5 307 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 FBXO40Q9UH90 709 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 ACTL7AQ9Y615 435 aa5.9□□□□□ -1.46
AMBRA1-209ENST00000529963 ELP1O95163 1332 aa5.9□□□□□ -1.47
AMBRA1-209ENST00000529963 A0A0U1RQG5 324 aaPredicted RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 LRRC14BA6NHZ5 514 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 PATE3B3GLJ2 98 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 RNF113AO15541 343 aaKnown RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 FOXD2O60548 495 aaPredicted RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 SNAI1O95863 264 aaPredicted RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 TTLL1O95922 423 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 GASTP01350 101 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 ZFYP08048 801 aaPredicted RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 ITGB8P26012 769 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 CST5P28325 142 aaPredicted RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 OAZ1P54368 228 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 TARDBPQ13148 414 aaKnown RBP eCLIP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 MRPL49Q13405 166 aaKnown RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 PPIGQ13427 754 aaKnown RBP eCLIP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 ELAVL1Q15717 326 aaKnown RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 LILRA6Q6PI73 481 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 C14orf80Q86SX3 495 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 GRAMD1CQ8IYS0 662 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 ANKRD35Q8N283 1001 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 KBTBD3Q8NAB2 608 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 KLHDC9Q8NEP7 349 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 CHST13Q8NET6 341 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 TMX3Q96JJ7 454 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 MYOCQ99972 504 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 TTYH1Q9H313 450 aaPredicted RBP5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 SLC38A10Q9HBR0 1119 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 LANCL2Q9NS86 450 aa5.89□□□□□ -1.47
AMBRA1-209ENST00000529963 TDP1Q9NUW8 608 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms