RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 DEPDC1Q5TB30 811 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 GGT6Q6P531 493 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 YAF2Q8IY57 180 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 CPXCR1Q8N123 301 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 LRRC71Q8N4P6 559 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 FANCBQ8NB91 859 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 CCT6BQ92526 530 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 R3HDM4Q96D70 268 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 C18orf8Q96DM3 657 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 DHX36Q9H2U1 1008 aaKnown RBP5.42□□□□□ -1.54
C11orf88-204ENST00000529661 ZSCAN32Q9NX65 697 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 ZNF212Q9UDV6 495 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 CCNL1Q9UK58 526 aaPredicted RBP5.42□□□□□ -1.54
C11orf88-204ENST00000529661 SLC39A10Q9ULF5 831 aa5.42□□□□□ -1.54
C11orf88-204ENST00000529661 MAGED2Q9UNF1 606 aaPredicted RBP5.42□□□□□ -1.54
C11orf88-204ENST00000529661 A0A087WZ62 844 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 QSOX1O00391 747 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 SKAP2O75563 359 aaPredicted RBP5.41□□□□□ -1.54
C11orf88-204ENST00000529661 RASSF9O75901 435 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 HNRNPCP07910 306 aaKnown RBP eCLIP5.41□□□□□ -1.54
C11orf88-204ENST00000529661 MYL4P12829 197 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 GABRB3P28472 473 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 ADORA2AP29274 412 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 RENBPP51606 427 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 PROK1P58294 105 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 NHLH1Q02575 133 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 BLMHQ13867 455 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 SLC29A2Q14542 456 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 ZIK1Q3SY52 487 aaPredicted RBP5.41□□□□□ -1.54
C11orf88-204ENST00000529661 RRAGBQ5VZM2 374 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 FCRL6Q6DN72 434 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 ZNF788Q6ZQV5 615 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 ZNF354CQ86Y25 554 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 GLIS1Q8NBF1 620 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 XAGE5Q8WWM1 108 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 SCLT1Q96NL6 688 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 ISCA1Q9BUE6 129 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 NECTIN3Q9NQS3 549 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 TBC1D23Q9NUY8 699 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 DKK4Q9UBT3 224 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 MID2Q9UJV3 735 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 TBC1D30Q9Y2I9 924 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 PCDHGB3Q9Y5G1 929 aa5.41□□□□□ -1.54
C11orf88-204ENST00000529661 LOC102723971A0A1B0GUV8 181 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 A1L4Q6 167 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 MANSC4A6NHS7 340 aaPredicted RBP5.4□□□□□ -1.54
C11orf88-204ENST00000529661 NPC1O15118 1278 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 CCP110O43303 1012 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 INMTO95050 263 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 NDST3O95803 873 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 CSF1RP07333 972 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 FAM163BP0C2L3 166 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 ENGP17813 658 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 PDE6CP51160 858 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 COPAP53621 1224 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 EEFSECP57772 596 aaKnown RBP5.4□□□□□ -1.54
C11orf88-204ENST00000529661 FOXO1Q12778 655 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 PTK2BQ14289 1009 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 SPARCL1Q14515 664 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 ZACNQ401N2 412 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 TMEM119Q4V9L6 283 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 FCRLBQ6BAA4 426 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 LDHAL6AQ6ZMR3 332 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 KIAA0408Q6ZU52 694 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 SLC29A4Q7RTT9 530 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 MYCT1Q8N699 235 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 BPIFB1Q8TDL5 484 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 OSCP1Q8WVF1 389 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 MUL1Q969V5 352 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 VOPP1Q96AW1 172 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 LRRC46Q96FV0 321 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 SNX27Q96L92 541 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 MAGEB5Q9BZ81 275 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 MYLK2Q9H1R3 596 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 TMEM8AQ9HCN3 771 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 DGKBQ9Y6T7 804 aa5.4□□□□□ -1.54
C11orf88-204ENST00000529661 FAM234BA2RU67 622 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 H0YIZ8 118 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 RBMXL2O75526 392 aaKnown RBP5.39□□□□□ -1.55
C11orf88-204ENST00000529661 ONECUT2O95948 504 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 HSD3B1P14060 373 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 KCNA3P22001 575 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 SERPINF1P36955 418 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 CCT5P48643 541 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 DGKEP52429 567 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 ATXN1P54253 815 aaKnown RBP5.39□□□□□ -1.55
C11orf88-204ENST00000529661 ARHGEF7Q14155 803 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 RAB30Q15771 203 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 PLAG1Q6DJT9 500 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 USP17L6PQ6QN14 398 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 CACNA2D3Q8IZS8 1091 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 CCDC150Q8NCX0 1101 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 TMEM171Q8WVE6 324 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 TBC1D20Q96BZ9 403 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 PPP1R9BQ96SB3 815 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 OBP2BQ9NPH6 170 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 DLL3Q9NYJ7 618 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 RGL1Q9NZL6 768 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 SH3BP4Q9P0V3 963 aa5.39□□□□□ -1.55
C11orf88-204ENST00000529661 HDAC9Q9UKV0 1011 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms