RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 TSTD1Q8NFU3 115 aa12.79□□□□□ -0.36
SORL1-208ENST00000529445 TAS1R2Q8TE23 839 aa12.79□□□□□ -0.36
SORL1-208ENST00000529445 USP33Q8TEY7 942 aa12.79□□□□□ -0.36
SORL1-208ENST00000529445 ZFRQ96KR1 1074 aaKnown RBP12.79□□□□□ -0.36
SORL1-208ENST00000529445 DUSP9Q99956 384 aaKnown RBP12.79□□□□□ -0.36
SORL1-208ENST00000529445 NT5C1AQ9BXI3 368 aa12.79□□□□□ -0.36
SORL1-208ENST00000529445 CCSER2Q9H7U1 834 aa12.79□□□□□ -0.36
SORL1-208ENST00000529445 MMRN2Q9H8L6 949 aa12.79□□□□□ -0.36
SORL1-208ENST00000529445 APOBEC3GQ9HC16 384 aaKnown RBP12.79□□□□□ -0.36
SORL1-208ENST00000529445 PNPLA8Q9NP80 782 aa12.79□□□□□ -0.36
SORL1-208ENST00000529445 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.79□□□□□ -0.36
SORL1-208ENST00000529445 TLR8Q9NR97 1041 aaKnown RBP12.79□□□□□ -0.36
SORL1-208ENST00000529445 POLR3BQ9NW08 1133 aaPredicted RBP12.79□□□□□ -0.36
SORL1-208ENST00000529445 RMND1Q9NWS8 449 aa12.79□□□□□ -0.36
SORL1-208ENST00000529445 EBF1Q9UH73 591 aa12.79□□□□□ -0.36
SORL1-208ENST00000529445 CHORDC1Q9UHD1 332 aaPredicted RBP12.79□□□□□ -0.36
SORL1-208ENST00000529445 SH3BP1Q9Y3L3 701 aa12.79□□□□□ -0.36
SORL1-208ENST00000529445 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.79□□□□□ -0.36
SORL1-208ENST00000529445 ACACBO00763 2458 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 MED19A0JLT2 244 aaPredicted RBP12.78□□□□□ -0.36
SORL1-208ENST00000529445 K7EQS6 105 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 STX10O60499 249 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 BEST1O76090 585 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 APODP05090 189 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 EPB41P11171 864 aaKnown RBP12.78□□□□□ -0.36
SORL1-208ENST00000529445 CD58P19256 250 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 MXI1P50539 228 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 ATXN1P54253 815 aaKnown RBP12.78□□□□□ -0.36
SORL1-208ENST00000529445 MRPS21P82921 87 aaKnown RBP12.78□□□□□ -0.36
SORL1-208ENST00000529445 GOLGA8FQ08AF8 430 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 GOLGA8DPQ0D2H9 430 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 BECN1Q14457 450 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 ELF2Q15723 593 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 C2orf27AQ580R0 203 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 KRT39Q6A163 491 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 KBTBD6Q86V97 674 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 TWNKQ96RR1 684 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 PNKPQ96T60 521 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 HNRNPABQ99729 332 aaKnown RBP12.78□□□□□ -0.36
SORL1-208ENST00000529445 MMP17Q9ULZ9 603 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 SCML2Q9UQR0 700 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 PCDHGA5Q9Y5G8 931 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 PCDHA5Q9Y5H7 936 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 NUP205Q92621 2012 aa12.78□□□□□ -0.36
SORL1-208ENST00000529445 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.77□□□□□ -0.37
SORL1-208ENST00000529445 GOLGA6L4A6NEF3 574 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 CETN3O15182 167 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 HOXC11O43248 304 aaPredicted RBP12.77□□□□□ -0.37
SORL1-208ENST00000529445 CILPO75339 1184 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 KAT7O95251 611 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 IRF1P10914 325 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 DGKEP52429 567 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 GAD2Q05329 585 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 PNOCQ13519 176 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 HSF5Q4G112 596 aaPredicted RBP12.77□□□□□ -0.37
SORL1-208ENST00000529445 PREPLQ4J6C6 727 aaPredicted RBP12.77□□□□□ -0.37
SORL1-208ENST00000529445 LY6G5CQ5SRR4 150 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 BTBD8Q5XKL5 378 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 RHBDF2Q6PJF5 856 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 CLEC20AQ6ZU45 233 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 C11orf74Q86VG3 221 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 SMYD4Q8IYR2 804 aaPredicted RBP12.77□□□□□ -0.37
SORL1-208ENST00000529445 FMR1NBQ8N0W7 255 aaPredicted RBP12.77□□□□□ -0.37
SORL1-208ENST00000529445 TTC39CQ8N584 583 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 JAKMIP2Q96AA8 810 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 CYFIP2Q96F07 1278 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 FAXDC2Q96IV6 333 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 ZC3H10Q96K80 434 aaKnown RBP12.77□□□□□ -0.37
SORL1-208ENST00000529445 TSG101Q99816 390 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 ARHGEF4Q9NR80 690 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 CHD8Q9HCK8 2581 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 THADAQ6YHU6 1953 aa12.77□□□□□ -0.37
SORL1-208ENST00000529445 EPG5Q9HCE0 2579 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 PLXND1Q9Y4D7 1925 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 ABCA7Q8IZY2 2146 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 SLC30A4O14863 429 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 CYP26A1O43174 497 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 ALDH1A2O94788 518 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 RHOBTB1O94844 696 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 SMC2O95347 1197 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 ACO1P21399 889 aaKnown RBP12.76□□□□□ -0.37
SORL1-208ENST00000529445 GRIA2P42262 883 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 MCCD1P59942 119 aaPredicted RBP12.76□□□□□ -0.37
SORL1-208ENST00000529445 KDSRQ06136 332 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 PLK5Q496M5 336 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 AASDHQ4L235 1098 aaPredicted RBP12.76□□□□□ -0.37
SORL1-208ENST00000529445 GPRIN1Q7Z2K8 1008 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 C12orf40Q86WS4 652 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 BBS7Q8IWZ6 715 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 C12orf50Q8NA57 414 aaPredicted RBP12.76□□□□□ -0.37
SORL1-208ENST00000529445 FBXL13Q8NEE6 735 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 CNOT6LQ96LI5 555 aaKnown RBP12.76□□□□□ -0.37
SORL1-208ENST00000529445 GSDMAQ96QA5 445 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 GTPBP4Q9BZE4 634 aaKnown RBP12.76□□□□□ -0.37
SORL1-208ENST00000529445 ARRDC1-AS1Q9H2J1 176 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 FAM124BQ9H5Z6 455 aaPredicted RBP12.76□□□□□ -0.37
SORL1-208ENST00000529445 CYLDQ9NQC7 956 aa12.76□□□□□ -0.37
SORL1-208ENST00000529445 HOOK1Q9UJC3 728 aaKnown RBP12.76□□□□□ -0.37
SORL1-208ENST00000529445 LSM7Q9UK45 103 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms