RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 E2F8A0AVK6 867 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 GOLGA8CPA6NN73 597 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 WASH3PC4AMC7 463 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 CLDN5O00501 218 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 TRIM66O15016 1216 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 TMEM191BP0C7N4 346 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 ATXN1LP0C7T5 689 aaKnown RBP20.19■□□□□ 0.82
SSRP1-204ENST00000529002 IRF1P10914 325 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 CASP5P51878 434 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 NOP14P78316 857 aaKnown RBP20.19■□□□□ 0.82
SSRP1-204ENST00000529002 TDRD10Q5VZ19 366 aaKnown RBP20.19■□□□□ 0.82
SSRP1-204ENST00000529002 BTBD8Q5XKL5 378 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 TRMT11Q7Z4G4 463 aaKnown RBP20.19■□□□□ 0.82
SSRP1-204ENST00000529002 CHPFQ8IZ52 775 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 MYCBPAPQ8TBZ2 947 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 C8orf48Q96LL4 319 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 FGFBP2Q9BYJ0 223 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 ZNF518BQ9C0D4 1074 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 DPEP3Q9H4B8 488 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 SCUBE2Q9NQ36 999 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 SPHK2Q9NRA0 654 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 TOR4AQ9NXH8 423 aa20.19■□□□□ 0.82
SSRP1-204ENST00000529002 CHORDC1Q9UHD1 332 aaPredicted RBP20.19■□□□□ 0.82
SSRP1-204ENST00000529002 FAM149AA5PLN7 773 aa20.18■□□□□ 0.82
SSRP1-204ENST00000529002 PRRT4C9JH25 899 aa20.18■□□□□ 0.82
SSRP1-204ENST00000529002 HOXC11O43248 304 aaPredicted RBP20.18■□□□□ 0.82
SSRP1-204ENST00000529002 ZNF217O75362 1048 aa20.18■□□□□ 0.82
SSRP1-204ENST00000529002 WARSP23381 471 aaKnown RBP20.18■□□□□ 0.82
SSRP1-204ENST00000529002 ABCD1P33897 745 aa20.18■□□□□ 0.82
SSRP1-204ENST00000529002 BNC1Q01954 994 aa20.18■□□□□ 0.82
SSRP1-204ENST00000529002 KIAA1324Q6UXG2 1013 aaKnown RBP20.18■□□□□ 0.82
SSRP1-204ENST00000529002 TMPRSS7Q7RTY8 843 aa20.18■□□□□ 0.82
SSRP1-204ENST00000529002 ZCCHC9Q8N567 271 aaKnown RBP20.18■□□□□ 0.82
SSRP1-204ENST00000529002 KRI1Q8N9T8 703 aaKnown RBP20.18■□□□□ 0.82
SSRP1-204ENST00000529002 GLIS3Q8NEA6 775 aa20.18■□□□□ 0.82
SSRP1-204ENST00000529002 MRGPRX1Q96LB2 322 aa20.18■□□□□ 0.82
SSRP1-204ENST00000529002 AK8Q96MA6 479 aa20.18■□□□□ 0.82
SSRP1-204ENST00000529002 CCSER2Q9H7U1 834 aa20.18■□□□□ 0.82
SSRP1-204ENST00000529002 MRPL44Q9H9J2 332 aaKnown RBP20.18■□□□□ 0.82
SSRP1-204ENST00000529002 PRDM16Q9HAZ2 1276 aa20.18■□□□□ 0.82
SSRP1-204ENST00000529002 CACNA2D2Q9NY47 1150 aa20.18■□□□□ 0.82
SSRP1-204ENST00000529002 SH3BP1Q9Y3L3 701 aa20.18■□□□□ 0.82
SSRP1-204ENST00000529002 TRABD2BA6NFA1 517 aa20.17■□□□□ 0.82
SSRP1-204ENST00000529002 PPP3CCP48454 512 aa20.17■□□□□ 0.82
SSRP1-204ENST00000529002 L1TD1Q5T7N2 865 aaKnown RBP20.17■□□□□ 0.82
SSRP1-204ENST00000529002 USP49Q70CQ1 688 aa20.17■□□□□ 0.82
SSRP1-204ENST00000529002 DPH6Q7L8W6 267 aa20.17■□□□□ 0.82
SSRP1-204ENST00000529002 GLRX5Q86SX6 157 aa20.17■□□□□ 0.82
SSRP1-204ENST00000529002 DDX42Q86XP3 938 aaKnown RBP eCLIP20.17■□□□□ 0.82
SSRP1-204ENST00000529002 KCNV2Q8TDN2 545 aa20.17■□□□□ 0.82
SSRP1-204ENST00000529002 HVCN1Q96D96 273 aa20.17■□□□□ 0.82
SSRP1-204ENST00000529002 ZSCAN31Q96LW9 406 aaPredicted RBP20.17■□□□□ 0.82
SSRP1-204ENST00000529002 SLITRK1Q96PX8 696 aa20.17■□□□□ 0.82
SSRP1-204ENST00000529002 ACCSQ96QU6 501 aa20.17■□□□□ 0.82
SSRP1-204ENST00000529002 MMS19Q96T76 1030 aa20.17■□□□□ 0.82
SSRP1-204ENST00000529002 MIR1-1HGQ9H1L0 117 aa20.17■□□□□ 0.82
SSRP1-204ENST00000529002 FAM124BQ9H5Z6 455 aaPredicted RBP20.17■□□□□ 0.82
SSRP1-204ENST00000529002 DNAJC17Q9NVM6 304 aaKnown RBP20.17■□□□□ 0.82
SSRP1-204ENST00000529002 INTS13Q9NVM9 706 aa20.17■□□□□ 0.82
SSRP1-204ENST00000529002 FNDC3AQ9Y2H6 1198 aaKnown RBP20.17■□□□□ 0.82
SSRP1-204ENST00000529002 SLC26A4O43511 780 aa20.16■□□□□ 0.82
SSRP1-204ENST00000529002 GNSP15586 552 aa20.16■□□□□ 0.82
SSRP1-204ENST00000529002 PGFP49763 221 aa20.16■□□□□ 0.82
SSRP1-204ENST00000529002 MYO1EQ12965 1108 aa20.16■□□□□ 0.82
SSRP1-204ENST00000529002 MAPRE1Q15691 268 aaKnown RBP20.16■□□□□ 0.82
SSRP1-204ENST00000529002 SYCP2LQ5T4T6 812 aa20.16■□□□□ 0.82
SSRP1-204ENST00000529002 GRAMD4Q6IC98 578 aa20.16■□□□□ 0.82
SSRP1-204ENST00000529002 SCAMP5Q8TAC9 235 aa20.16■□□□□ 0.82
SSRP1-204ENST00000529002 FBXO32Q969P5 355 aa20.16■□□□□ 0.82
SSRP1-204ENST00000529002 CEP295NLQ96MC4 621 aa20.16■□□□□ 0.82
SSRP1-204ENST00000529002 GAREM1Q9H706 876 aa20.16■□□□□ 0.82
SSRP1-204ENST00000529002 ASH1LQ9NR48 2969 aaKnown RBP20.16■□□□□ 0.82
SSRP1-204ENST00000529002 SUSD2Q9UGT4 822 aa20.16■□□□□ 0.82
SSRP1-204ENST00000529002 BTBD3Q9Y2F9 522 aa20.16■□□□□ 0.82
SSRP1-204ENST00000529002 STARD13Q9Y3M8 1113 aa20.16■□□□□ 0.82
SSRP1-204ENST00000529002 MEI4A8MW99 385 aa20.15■□□□□ 0.82
SSRP1-204ENST00000529002 ZBTB24O43167 697 aaPredicted RBP20.15■□□□□ 0.82
SSRP1-204ENST00000529002 C1QL1O75973 258 aa20.15■□□□□ 0.82
SSRP1-204ENST00000529002 GCNT3O95395 438 aa20.15■□□□□ 0.82
SSRP1-204ENST00000529002 YWHAQP27348 245 aa20.15■□□□□ 0.82
SSRP1-204ENST00000529002 WDR45BQ5MNZ6 344 aa20.15■□□□□ 0.82
SSRP1-204ENST00000529002 BAHD1Q8TBE0 780 aaPredicted RBP20.15■□□□□ 0.82
SSRP1-204ENST00000529002 OTUB2Q96DC9 234 aa20.15■□□□□ 0.82
SSRP1-204ENST00000529002 TOE1Q96GM8 510 aaKnown RBP20.15■□□□□ 0.82
SSRP1-204ENST00000529002 ANKRD36BP1Q96IX9 119 aa20.15■□□□□ 0.82
SSRP1-204ENST00000529002 KCNK16Q96T55 309 aa20.15■□□□□ 0.82
SSRP1-204ENST00000529002 GABRG3Q99928 467 aa20.15■□□□□ 0.82
SSRP1-204ENST00000529002 GPR174Q9BXC1 333 aa20.15■□□□□ 0.82
SSRP1-204ENST00000529002 B3GNT5Q9BYG0 378 aa20.15■□□□□ 0.82
SSRP1-204ENST00000529002 TM7SF3Q9NS93 570 aa20.15■□□□□ 0.82
SSRP1-204ENST00000529002 EHD2Q9NZN4 543 aa20.15■□□□□ 0.82
SSRP1-204ENST00000529002 KIAA1522Q9P206 1035 aaPredicted RBP20.15■□□□□ 0.82
SSRP1-204ENST00000529002 EXOC7Q9UPT5 735 aa20.15■□□□□ 0.82
SSRP1-204ENST00000529002 TP53BP1Q12888 1972 aaPredicted RBP20.14■□□□□ 0.81
SSRP1-204ENST00000529002 A0A1B0GTW7 788 aa20.14■□□□□ 0.81
SSRP1-204ENST00000529002 NEDD8-MDP1E9PL57 170 aa20.14■□□□□ 0.81
SSRP1-204ENST00000529002 CILPO75339 1184 aa20.14■□□□□ 0.81
SSRP1-204ENST00000529002 LDHAP00338 332 aaKnown RBP20.14■□□□□ 0.81
SSRP1-204ENST00000529002 PTPN1P18031 435 aaKnown RBP20.14■□□□□ 0.81
SSRP1-204ENST00000529002 GARTP22102 1010 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms