RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 PDCP20941 246 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 CASP5P51878 434 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 PLEKHG6Q3KR16 790 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 WDR72Q3MJ13 1102 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 WDR45BQ5MNZ6 344 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 GRAMD4Q6IC98 578 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 TRAPPC11Q7Z392 1133 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 LIMS2Q7Z4I7 341 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 C12orf40Q86WS4 652 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 CHCHD4Q8N4Q1 142 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 DEFB119Q8N690 84 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 FRMD1Q8N878 549 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 TERB1Q8NA31 727 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 B3GALNT2Q8NCR0 500 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 OR5B17Q8NGF7 314 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 FOXJ1Q92949 421 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 MED10Q9BTT4 135 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 ZDHHC4Q9NPG8 344 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 SPHK2Q9NRA0 654 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 HSPBP1Q9NZL4 362 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 LSM7Q9UK45 103 aaKnown RBP12.27□□□□□ -0.45
CMTM1-211ENST00000528484 SRPRBQ9Y5M8 271 aaKnown RBP12.27□□□□□ -0.45
CMTM1-211ENST00000528484 LOC400499M0QZD8 3231 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 CEP192Q8TEP8 1941 aa12.27□□□□□ -0.45
CMTM1-211ENST00000528484 COCHO43405 550 aa12.26□□□□□ -0.45
CMTM1-211ENST00000528484 PHACTR2O75167 634 aa12.26□□□□□ -0.45
CMTM1-211ENST00000528484 TULP3O75386 442 aa12.26□□□□□ -0.45
CMTM1-211ENST00000528484 GABRG2P18507 467 aa12.26□□□□□ -0.45
CMTM1-211ENST00000528484 TUBP50607 506 aa12.26□□□□□ -0.45
CMTM1-211ENST00000528484 TRIP6Q15654 476 aaKnown RBP12.26□□□□□ -0.45
CMTM1-211ENST00000528484 CBWD2Q8IUF1 395 aa12.26□□□□□ -0.45
CMTM1-211ENST00000528484 SFTPA1Q8IWL2 248 aa12.26□□□□□ -0.45
CMTM1-211ENST00000528484 SYAP1Q96A49 352 aaPredicted RBP12.26□□□□□ -0.45
CMTM1-211ENST00000528484 FAM84AQ96KN4 292 aa12.26□□□□□ -0.45
CMTM1-211ENST00000528484 TNIP3Q96KP6 325 aa12.26□□□□□ -0.45
CMTM1-211ENST00000528484 HSPA12BQ96MM6 686 aa12.26□□□□□ -0.45
CMTM1-211ENST00000528484 MRPL45Q9BRJ2 306 aaKnown RBP12.26□□□□□ -0.45
CMTM1-211ENST00000528484 ZDHHC5Q9C0B5 715 aa12.26□□□□□ -0.45
CMTM1-211ENST00000528484 ZNF518BQ9C0D4 1074 aa12.26□□□□□ -0.45
CMTM1-211ENST00000528484 CAPN10Q9HC96 672 aa12.26□□□□□ -0.45
CMTM1-211ENST00000528484 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.26□□□□□ -0.459e-12■■■■■ 149.1
CMTM1-211ENST00000528484 DNAJC17Q9NVM6 304 aaKnown RBP12.26□□□□□ -0.45
CMTM1-211ENST00000528484 DNAAF2Q9NVR5 837 aaKnown RBP12.26□□□□□ -0.45
CMTM1-211ENST00000528484 CYP8B1Q9UNU6 501 aa12.26□□□□□ -0.45
CMTM1-211ENST00000528484 APOBEC2Q9Y235 224 aaKnown RBP12.26□□□□□ -0.45
CMTM1-211ENST00000528484 ADAMTS9Q9P2N4 1935 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 FRMD3A2A2Y4 597 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 ANTXRLA6NF34 631 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 IRF1P10914 325 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 HOXB3P14651 431 aaPredicted RBP12.25□□□□□ -0.45
CMTM1-211ENST00000528484 ATICP31939 592 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 WASP42768 502 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 AMPD3Q01432 767 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 STARD3Q14849 445 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 E2F5Q15329 346 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 SNRNP35Q16560 246 aaKnown RBP12.25□□□□□ -0.45
CMTM1-211ENST00000528484 USP49Q70CQ1 688 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 RAB44Q7Z6P3 723 aaPredicted RBP12.25□□□□□ -0.45
CMTM1-211ENST00000528484 PROSER1Q86XN7 944 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 ETFBKMTQ8IXQ9 262 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 TRIML1Q8N9V2 468 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 RDH13Q8NBN7 331 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 IPO4Q8TEX9 1081 aaKnown RBP12.25□□□□□ -0.45
CMTM1-211ENST00000528484 SMARCD1Q96GM5 515 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 CGRRF1Q99675 332 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 DUSP9Q99956 384 aaKnown RBP12.25□□□□□ -0.45
CMTM1-211ENST00000528484 DMAP1Q9NPF5 467 aaPredicted RBP12.25□□□□□ -0.45
CMTM1-211ENST00000528484 FSCN3Q9NQT6 498 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 COMMD8Q9NX08 183 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 WDR35Q9P2L0 1181 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 NXF1Q9UBU9 619 aaKnown RBP12.25□□□□□ -0.45
CMTM1-211ENST00000528484 STARD13Q9Y3M8 1113 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 CLIC4Q9Y696 253 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 PTPRJQ12913 1337 aa12.25□□□□□ -0.45
CMTM1-211ENST00000528484 IGHV1OR15-9A0A0B4J2B8 117 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 FAM221BA6H8Z2 402 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 EIF4E1BA6NMX2 242 aaKnown RBP12.24□□□□□ -0.45
CMTM1-211ENST00000528484 MEI4A8MW99 385 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 NEDD8-MDP1E9PL57 170 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 CLDN5O00501 218 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 EIF3DO15371 548 aaKnown RBP eCLIP12.24□□□□□ -0.45
CMTM1-211ENST00000528484 P4HA1P13674 534 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 SLC5A3P53794 718 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 MESP2Q0VG99 397 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 KIAA1324Q6UXG2 1013 aaKnown RBP12.24□□□□□ -0.45
CMTM1-211ENST00000528484 NAXDQ8IW45 347 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 BBS7Q8IWZ6 715 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 PHTF2Q8N3S3 785 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 CCDC127Q96BQ5 260 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 BBS2Q9BXC9 721 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 PANK2Q9BZ23 570 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 FBXO44Q9H4M3 255 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 CCDC86Q9H6F5 360 aaKnown RBP12.24□□□□□ -0.45
CMTM1-211ENST00000528484 TLR8Q9NR97 1041 aaKnown RBP12.24□□□□□ -0.45
CMTM1-211ENST00000528484 CHORDC1Q9UHD1 332 aaPredicted RBP12.24□□□□□ -0.45
CMTM1-211ENST00000528484 FBXO2Q9UK22 296 aaPredicted RBP12.24□□□□□ -0.45
CMTM1-211ENST00000528484 ITPR1Q14643 2758 aa12.24□□□□□ -0.45
CMTM1-211ENST00000528484 GFRA2O00451 464 aa12.23□□□□□ -0.45
CMTM1-211ENST00000528484 SH3BP5O60239 455 aa12.23□□□□□ -0.45
CMTM1-211ENST00000528484 TLR5O60602 858 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms