RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	MRPL45	Q9BRJ2	306 aa	Known RBP	10.65	□□□□□ -0.7
PGAP2-231	ENST00000528216	RABEP2	Q9H5N1	569 aa		10.65	□□□□□ -0.7
PGAP2-231	ENST00000528216	ACSS3	Q9H6R3	686 aa		10.65	□□□□□ -0.7
PGAP2-231	ENST00000528216	VPS37B	Q9H9H4	285 aa		10.65	□□□□□ -0.7
PGAP2-231	ENST00000528216	SLC38A7	Q9NVC3	462 aa		10.65	□□□□□ -0.7
PGAP2-231	ENST00000528216	TJP2	Q9UDY2	1190 aa		10.65	□□□□□ -0.7
PGAP2-231	ENST00000528216	PCSK1N	Q9UHG2	260 aa		10.65	□□□□□ -0.7
PGAP2-231	ENST00000528216	CLUH	O75153	1309 aa		10.65	□□□□□ -0.7
PGAP2-231	ENST00000528216	CCT8L1P	A6NM43	557 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216		A8MXQ7	604 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	KPNA7	A9QM74	516 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	HUS1	O60921	280 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	GBP2	P32456	591 aa	Predicted RBP	10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	GNL1	P36915	607 aa	Predicted RBP	10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	IRX5	P78411	483 aa	Predicted RBP	10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	DPYSL2	Q16555	572 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	KCNT1	Q5JUK3	1230 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	RNF187	Q5TA31	235 aa	Predicted RBP	10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	ACOT1	Q86TX2	421 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	TTC30A	Q86WT1	665 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	ZBED8	Q8IZ13	594 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	APPL2	Q8NEU8	664 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	OR6B3	Q8NGW1	331 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	ZMAT2	Q96NC0	199 aa	Known RBP	10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	SMC6	Q96SB8	1091 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	PPP1R16B	Q96T49	567 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	FAM118B	Q9BPY3	351 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	FERMT1	Q9BQL6	677 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	KLC2	Q9H0B6	622 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	FAM49A	Q9H0Q0	323 aa	Predicted RBP	10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	KCNK9	Q9NPC2	374 aa		10.65	□□□□□ -0.71
PGAP2-231	ENST00000528216	SMIM28	A0A1B0GU29	152 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	C17orf102	A2RUQ5	167 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	HACD1	B0YJ81	288 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	XPO1	O14980	1071 aa	Known RBP	10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	TRIM66	O15016	1216 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	FAM155B	O75949	473 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	ZWINT	O95229	277 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	ZSCAN5DP	P0CG00	497 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	AIF1	P55008	147 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	BCAR1	P56945	870 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	DYNLT1	P63172	113 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	ORC1	Q13415	861 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	SPARCL1	Q14515	664 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	QPCT	Q16769	361 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	SOWAHA	Q2M3V2	549 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	PMF1	Q6P1K2	205 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	CTU1	Q7Z7A3	348 aa	Known RBP	10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	LRRC34	Q8IZ02	419 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	MICALL1	Q8N3F8	863 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	PLD5	Q8N7P1	536 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	GLIS1	Q8NBF1	620 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	MCU	Q8NE86	351 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	FAM172A	Q8WUF8	416 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	PEBP4	Q96S96	227 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	CYTH2	Q99418	400 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	OSMR	Q99650	979 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	APBA2	Q99767	749 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	DHRS4	Q9BTZ2	278 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	C11orf84	Q9BUA3	381 aa	Predicted RBP	10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	EIF2A	Q9BY44	585 aa	Known RBP	10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	PCDH18	Q9HCL0	1135 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	PNPLA8	Q9NP80	782 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	GABRQ	Q9UN88	632 aa		10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	PIN4	Q9Y237	131 aa	Known RBP	10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	USP15	Q9Y4E8	981 aa	Predicted RBP	10.64	□□□□□ -0.71
PGAP2-231	ENST00000528216	SF3B1	O75533	1304 aa	Known RBP eCLIP	10.64	□□□□□ -0.71	4e-7	■■■■■ 40.1
PGAP2-231	ENST00000528216		H0YHG0	523 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216		H7C0C1	242 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	PAPSS1	O43252	624 aa	Predicted RBP	10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	SNX3	O60493	162 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	OAS1	P00973	400 aa	Known RBP	10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	GNRH1	P01148	92 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	ETS1	P14921	441 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	CYP2B6	P20813	491 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	ATP5O	P48047	213 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	ZNF135	P52742	658 aa	Predicted RBP	10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	CDK16	Q00536	496 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	PRKCZ	Q05513	592 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	PDE4C	Q08493	712 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	TMED2	Q15363	201 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	ANKRD20A8P	Q5CZ79	823 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	UBAP2	Q5T6F2	1119 aa	Known RBP	10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	ADGRD1	Q6QNK2	874 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	RSPH3	Q86UC2	560 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	PALM2	Q8IXS6	379 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	SRRM1	Q8IYB3	904 aa	Known RBP	10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	KCTD13	Q8WZ19	329 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	CCT6B	Q92526	530 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	ACSF2	Q96CM8	615 aa	Predicted RBP	10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	HNRNPAB	Q99729	332 aa	Known RBP	10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	TRABD	Q9H4I3	376 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	NGRN	Q9NPE2	291 aa	Known RBP	10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	CHST12	Q9NRB3	414 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	DNAJC17	Q9NVM6	304 aa	Known RBP	10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	TMEM51	Q9NW97	253 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	TUBGCP4	Q9UGJ1	667 aa		10.63	□□□□□ -0.71
PGAP2-231	ENST00000528216	SRRD	Q9UH36	339 aa		10.63	□□□□□ -0.71

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