RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 TRIM43BA6NCK2 446 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 GNAZP19086 355 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 ABL2P42684 1182 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 VCPP55072 806 aaKnown RBP13.6□□□□□ -0.23
RBM39-243ENST00000528062 POU5F1BQ06416 359 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 PDIA2Q13087 525 aaKnown RBP13.6□□□□□ -0.23
RBM39-243ENST00000528062 MORF4L2Q15014 288 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 SEZ6Q53EL9 994 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 PLEKHG4Q58EX7 1191 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 FAM26DQ5JW98 314 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 ZNF410Q86VK4 478 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 LRRC8CQ8TDW0 803 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 NLRP7Q8WX94 980 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 TRIM43Q96BQ3 446 aaPredicted RBP13.6□□□□□ -0.23
RBM39-243ENST00000528062 VWCEQ96DN2 955 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 RBM41Q96IZ5 413 aaKnown RBP13.6□□□□□ -0.23
RBM39-243ENST00000528062 MCEEQ96PE7 176 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 WDR83Q9BRX9 315 aaKnown RBP13.6□□□□□ -0.23
RBM39-243ENST00000528062 TBC1D10AQ9BXI6 508 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 C12orf65Q9H3J6 166 aaKnown RBP13.6□□□□□ -0.23
RBM39-243ENST00000528062 STYXL1Q9Y6J8 313 aa13.6□□□□□ -0.23
RBM39-243ENST00000528062 hCG_1818297A0A087WSY0 165 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 TJP3O95049 919 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 IFNB1P01574 187 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 EPHB2P29323 1055 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 MSS51Q4VC12 460 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 ANKRD22Q5VYY1 191 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 LVRNQ6Q4G3 990 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 CEP128Q6ZU80 1094 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 ZNF606Q8WXB4 792 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 AGO3Q9H9G7 860 aaKnown RBP13.59□□□□□ -0.23
RBM39-243ENST00000528062 RBAKQ9NYW8 714 aaPredicted RBP13.59□□□□□ -0.23
RBM39-243ENST00000528062 SAE1Q9UBE0 346 aaPredicted RBP13.59□□□□□ -0.23
RBM39-243ENST00000528062 TRPV2Q9Y5S1 764 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 B4GALT5O43286 388 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 CLTBP09497 229 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 DARSP14868 501 aaKnown RBP13.59□□□□□ -0.23
RBM39-243ENST00000528062 KRT4P19013 534 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 CDKN2BP42772 138 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 ZNF132P52740 706 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 MTM1Q13496 603 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 MAPK6Q16659 721 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 LONP2Q86WA8 852 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 AGGF1Q8N302 714 aaeCLIP13.59□□□□□ -0.234e-21■□□□□ 8
RBM39-243ENST00000528062 ZNF276Q8N554 614 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 DEPTORQ8TB45 409 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 ZNF75CPQ92670 426 aaPredicted RBP13.59□□□□□ -0.23
RBM39-243ENST00000528062 RNPEPL1Q9HAU8 725 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 BATF3Q9NR55 127 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 KANSL3Q9P2N6 904 aa13.59□□□□□ -0.23
RBM39-243ENST00000528062 PSMC3IPQ9P2W1 217 aaPredicted RBP13.59□□□□□ -0.23
RBM39-243ENST00000528062 DRG1Q9Y295 367 aaKnown RBP13.59□□□□□ -0.23
RBM39-243ENST00000528062 PITPNM1O00562 1244 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 ATP5HO75947 161 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 ADRA1DP25100 572 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 SSTR1P30872 391 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 CRYBB1P53674 252 aaPredicted RBP13.58□□□□□ -0.24
RBM39-243ENST00000528062 GDF10P55107 478 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 TAF1BQ53T94 588 aaPredicted RBP13.58□□□□□ -0.24
RBM39-243ENST00000528062 EFHC2Q5JST6 749 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 INPP5DQ92835 1189 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 NKD2Q969F2 451 aaPredicted RBP13.58□□□□□ -0.24
RBM39-243ENST00000528062 FZD8Q9H461 694 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 SENP1Q9P0U3 644 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 RABGEF1Q9UJ41 708 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 SHOC2Q9UQ13 582 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 FARP1Q9Y4F1 1045 aaPredicted RBP13.58□□□□□ -0.24
RBM39-243ENST00000528062 CNTNAP2Q9UHC6 1331 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 LAMA3Q16787 3333 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 LRRD1A4D1F6 860 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 SGK1O00141 431 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 DCTN3O75935 186 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 EIF4BP23588 611 aaKnown RBP13.58□□□□□ -0.24
RBM39-243ENST00000528062 CETN2P41208 172 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 MCL1Q07820 350 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 TFDP1Q14186 410 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 LPIN1Q14693 890 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 FBXO47Q5MNV8 452 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 FNBP1LQ5T0N5 605 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 HHATQ5VTY9 493 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 CENPUQ71F23 418 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 UBR7Q8N806 425 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 TARS2Q9BW92 718 aaKnown RBP13.58□□□□□ -0.24
RBM39-243ENST00000528062 PPP1R12CQ9BZL4 782 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 TRIM6Q9C030 488 aaPredicted RBP13.58□□□□□ -0.24
RBM39-243ENST00000528062 HIPK3Q9H422 1215 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 NPHS2Q9NP85 383 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 ANKFY1Q9P2R3 1169 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 SLC24A2Q9UI40 661 aa13.58□□□□□ -0.24
RBM39-243ENST00000528062 WDR91A4D1P6 747 aa13.57□□□□□ -0.24
RBM39-243ENST00000528062 C3orf70A6NLC5 250 aaPredicted RBP13.57□□□□□ -0.24
RBM39-243ENST00000528062 EIF4E1BA6NMX2 242 aaKnown RBP13.57□□□□□ -0.24
RBM39-243ENST00000528062 NBNO60934 754 aa13.57□□□□□ -0.24
RBM39-243ENST00000528062 SMNDC1O75940 238 aaKnown RBP eCLIP13.57□□□□□ -0.248e-11■■■□□ 15.9
RBM39-243ENST00000528062 ITGAVP06756 1048 aa13.57□□□□□ -0.24
RBM39-243ENST00000528062 TPBGLP0DKB5 382 aa13.57□□□□□ -0.24
RBM39-243ENST00000528062 CALB2P22676 271 aa13.57□□□□□ -0.24
RBM39-243ENST00000528062 CYP2C18P33260 490 aa13.57□□□□□ -0.24
RBM39-243ENST00000528062 PHKA2P46019 1235 aa13.57□□□□□ -0.24
RBM39-243ENST00000528062 TCTN1Q2MV58 587 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms