RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 SATB1Q01826 763 aa34.85■■■■□ 3.17
SSSCA1-205ENST00000527920 KLHDC10Q6PID8 442 aa34.85■■■■□ 3.17
SSSCA1-205ENST00000527920 ADGRG2Q8IZP9 1017 aa34.85■■■■□ 3.17
SSSCA1-205ENST00000527920 ANKRD52Q8NB46 1076 aa34.85■■■■□ 3.17
SSSCA1-205ENST00000527920 LMO3Q8TAP4 145 aa34.85■■■■□ 3.17
SSSCA1-205ENST00000527920 CLSTN2Q9H4D0 955 aa34.85■■■■□ 3.17
SSSCA1-205ENST00000527920 CYP26A1O43174 497 aa34.84■■■■□ 3.17
SSSCA1-205ENST00000527920 PGFP49763 221 aa34.84■■■■□ 3.17
SSSCA1-205ENST00000527920 PSEN1P49768 467 aa34.84■■■■□ 3.17
SSSCA1-205ENST00000527920 GALK1P51570 392 aa34.84■■■■□ 3.17
SSSCA1-205ENST00000527920 SLC8A3P57103 927 aa34.84■■■■□ 3.17
SSSCA1-205ENST00000527920 ZNF276Q8N554 614 aa34.84■■■■□ 3.17
SSSCA1-205ENST00000527920 CD101Q93033 1021 aa34.84■■■■□ 3.17
SSSCA1-205ENST00000527920 JAKMIP2Q96AA8 810 aa34.84■■■■□ 3.17
SSSCA1-205ENST00000527920 NACA2Q9H009 215 aa34.84■■■■□ 3.17
SSSCA1-205ENST00000527920 KIAA1257Q9ULG3 409 aa34.84■■■■□ 3.17
SSSCA1-205ENST00000527920 GVINP1Q7Z2Y8 2422 aa34.84■■■■□ 3.17
SSSCA1-205ENST00000527920 MYH10P35580 1976 aa34.83■■■■□ 3.17
SSSCA1-205ENST00000527920 CCDC192P0DO97 292 aa34.83■■■■□ 3.17
SSSCA1-205ENST00000527920 HOXA6P31267 233 aa34.83■■■■□ 3.17
SSSCA1-205ENST00000527920 KCNH2Q12809 1159 aa34.83■■■■□ 3.17
SSSCA1-205ENST00000527920 MLKLQ8NB16 471 aa34.83■■■■□ 3.17
SSSCA1-205ENST00000527920 FBRSL1Q9HCM7 1045 aaKnown RBP34.83■■■■□ 3.17
SSSCA1-205ENST00000527920 UTP18Q9Y5J1 556 aaKnown RBP eCLIP34.83■■■■□ 3.17
SSSCA1-205ENST00000527920 CYP17A1P05093 508 aa34.82■■■■□ 3.16
SSSCA1-205ENST00000527920 LRMPQ12912 555 aa34.82■■■■□ 3.16
SSSCA1-205ENST00000527920 SGO2Q562F6 1265 aa34.82■■■■□ 3.16
SSSCA1-205ENST00000527920 CHURC1-FNTBB4DL54 471 aa34.81■■■■□ 3.16
SSSCA1-205ENST00000527920 ATG13O75143 517 aa34.81■■■■□ 3.16
SSSCA1-205ENST00000527920 EGFP01133 1207 aa34.81■■■■□ 3.16
SSSCA1-205ENST00000527920 ATP5C1P36542 298 aaKnown RBP34.81■■■■□ 3.16
SSSCA1-205ENST00000527920 DHCR24Q15392 516 aa34.81■■■■□ 3.16
SSSCA1-205ENST00000527920 RAB41Q5JT25 222 aa34.81■■■■□ 3.16
SSSCA1-205ENST00000527920 SUMF1Q8NBK3 374 aa34.81■■■■□ 3.16
SSSCA1-205ENST00000527920 MTPAPQ9NVV4 582 aaKnown RBP eCLIP34.81■■■■□ 3.16
SSSCA1-205ENST00000527920 OSER1Q9NX31 292 aa34.81■■■■□ 3.16
SSSCA1-205ENST00000527920 CLIC5Q9NZA1 410 aa34.81■■■■□ 3.16
SSSCA1-205ENST00000527920 K7ESF4 209 aa34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 ADH1CP00326 375 aa34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 AFPP02771 609 aaKnown RBP34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 PAEPP09466 180 aa34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 VDRP11473 427 aa34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 BCAT1P54687 386 aa34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 GCNT1Q02742 428 aa34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 GAB4Q2WGN9 574 aa34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 NAIF1Q69YI7 327 aaPredicted RBP34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 TADA2BQ86TJ2 420 aa34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 PIGZQ86VD9 579 aa34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 CCDC26Q8TAB7 109 aa34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 EPC1Q9H2F5 836 aa34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 SH3BP1Q9Y3L3 701 aa34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 EP300Q09472 2414 aaPredicted RBP34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 OTOGLQ3ZCN5 2332 aa34.8■■■■□ 3.16
SSSCA1-205ENST00000527920 A0A1W2PQH9 124 aa34.79■■■■□ 3.16
SSSCA1-205ENST00000527920 EIF2DP41214 584 aaKnown RBP34.79■■■■□ 3.16
SSSCA1-205ENST00000527920 TTC30AQ86WT1 665 aa34.79■■■■□ 3.16
SSSCA1-205ENST00000527920 PPM1KQ8N3J5 372 aa34.79■■■■□ 3.16
SSSCA1-205ENST00000527920 EHBP1Q8NDI1 1231 aa34.79■■■■□ 3.16
SSSCA1-205ENST00000527920 CDK5RAP1Q96SZ6 601 aaKnown RBP34.79■■■■□ 3.16
SSSCA1-205ENST00000527920 KLF16Q9BXK1 252 aaPredicted RBP34.79■■■■□ 3.16
SSSCA1-205ENST00000527920 NMUR1Q9HB89 426 aa34.79■■■■□ 3.16
SSSCA1-205ENST00000527920 HESX1Q9UBX0 185 aa34.79■■■■□ 3.16
SSSCA1-205ENST00000527920 TSPAN16Q9UKR8 245 aa34.79■■■■□ 3.16
SSSCA1-205ENST00000527920 GPR179Q6PRD1 2367 aa34.79■■■■□ 3.16
SSSCA1-205ENST00000527920 OPRD1P41143 372 aa34.78■■■■□ 3.16
SSSCA1-205ENST00000527920 GOLGA8FQ08AF8 430 aa34.78■■■■□ 3.16
SSSCA1-205ENST00000527920 GOLGA8DPQ0D2H9 430 aa34.78■■■■□ 3.16
SSSCA1-205ENST00000527920 GOLGA7BQ2TAP0 167 aa34.78■■■■□ 3.16
SSSCA1-205ENST00000527920 RHBDF2Q6PJF5 856 aa34.78■■■■□ 3.16
SSSCA1-205ENST00000527920 SCD5Q86SK9 330 aa34.78■■■■□ 3.16
SSSCA1-205ENST00000527920 ARHGAP18Q8N392 663 aa34.78■■■■□ 3.16
SSSCA1-205ENST00000527920 O00370 1275 aa34.77■■■■□ 3.16
SSSCA1-205ENST00000527920 XPO1O14980 1071 aaKnown RBP34.77■■■■□ 3.16
SSSCA1-205ENST00000527920 RNF40O75150 1001 aa34.77■■■■□ 3.16
SSSCA1-205ENST00000527920 RARGP13631 454 aa34.77■■■■□ 3.16
SSSCA1-205ENST00000527920 BST2Q10589 180 aaKnown RBP34.77■■■■□ 3.16
SSSCA1-205ENST00000527920 HTR3DQ70Z44 454 aa34.77■■■■□ 3.16
SSSCA1-205ENST00000527920 MED15Q96RN5 788 aa34.77■■■■□ 3.16
SSSCA1-205ENST00000527920 DNMT3LQ9UJW3 386 aa34.77■■■■□ 3.16
SSSCA1-205ENST00000527920 NAGPAQ9UK23 515 aa34.77■■■■□ 3.16
SSSCA1-205ENST00000527920 MYO16Q9Y6X6 1858 aa34.76■■■■□ 3.16
SSSCA1-205ENST00000527920 TBX18O95935 607 aa34.76■■■■□ 3.16
SSSCA1-205ENST00000527920 RALAP11233 206 aa34.76■■■■□ 3.16
SSSCA1-205ENST00000527920 CD19P15391 556 aa34.76■■■■□ 3.16
SSSCA1-205ENST00000527920 TMEM270Q6UE05 265 aa34.76■■■■□ 3.16
SSSCA1-205ENST00000527920 EZH1Q92800 747 aaPredicted RBP34.76■■■■□ 3.16
SSSCA1-205ENST00000527920 C2orf42Q9NWW7 574 aa34.76■■■■□ 3.16
SSSCA1-205ENST00000527920 SCAMP3O14828 347 aaKnown RBP34.75■■■■□ 3.15
SSSCA1-205ENST00000527920 GREM1O60565 184 aa34.75■■■■□ 3.15
SSSCA1-205ENST00000527920 SETSIPP0DME0 302 aa34.75■■■■□ 3.15
SSSCA1-205ENST00000527920 ADH5P11766 374 aa34.75■■■■□ 3.15
SSSCA1-205ENST00000527920 PDE4CQ08493 712 aa34.75■■■■□ 3.15
SSSCA1-205ENST00000527920 PKN3Q6P5Z2 889 aa34.75■■■■□ 3.15
SSSCA1-205ENST00000527920 LCLAT1Q6UWP7 414 aa34.75■■■■□ 3.15
SSSCA1-205ENST00000527920 CNOT6LQ96LI5 555 aaKnown RBP34.75■■■■□ 3.15
SSSCA1-205ENST00000527920 PCDHB4Q9Y5E5 795 aa34.75■■■■□ 3.15
SSSCA1-205ENST00000527920 PLA2G4AP47712 749 aa34.74■■■■□ 3.15
SSSCA1-205ENST00000527920 STILQ15468 1287 aa34.74■■■■□ 3.15
SSSCA1-205ENST00000527920 PKDCCQ504Y2 493 aa34.74■■■■□ 3.15
SSSCA1-205ENST00000527920 C10orf120Q5SQS8 335 aa34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms