RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 CCDC82Q8N4S0 544 aa7.5□□□□□ -1.21
VPS26B-204ENST00000527586 C18orf25Q96B23 403 aaPredicted RBP7.5□□□□□ -1.21
VPS26B-204ENST00000527586 LENG9Q96B70 501 aa7.5□□□□□ -1.21
VPS26B-204ENST00000527586 ORAI3Q9BRQ5 295 aa7.5□□□□□ -1.21
VPS26B-204ENST00000527586 SLC12A9Q9BXP2 914 aa7.5□□□□□ -1.21
VPS26B-204ENST00000527586 NFKBIZQ9BYH8 718 aa7.5□□□□□ -1.21
VPS26B-204ENST00000527586 RPF1Q9H9Y2 349 aaKnown RBP7.5□□□□□ -1.21
VPS26B-204ENST00000527586 CBX8Q9HC52 389 aa7.5□□□□□ -1.21
VPS26B-204ENST00000527586 PRDM8Q9NQV8 689 aa7.5□□□□□ -1.21
VPS26B-204ENST00000527586 SEL1LQ9UBV2 794 aa7.5□□□□□ -1.21
VPS26B-204ENST00000527586 USP20Q9Y2K6 914 aa7.5□□□□□ -1.21
VPS26B-204ENST00000527586 PPME1Q9Y570 386 aa7.5□□□□□ -1.21
VPS26B-204ENST00000527586 PCDHGA7Q9Y5G6 932 aa7.5□□□□□ -1.21
VPS26B-204ENST00000527586 JMJD1CQ15652 2540 aa7.5□□□□□ -1.21
VPS26B-204ENST00000527586 TTC41PQ6P2S7 1318 aa7.5□□□□□ -1.21
VPS26B-204ENST00000527586 TACC2O95359 2948 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 SMCO2A6NFE2 343 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 KIAA1324LA8MWY0 1029 aaPredicted RBP7.49□□□□□ -1.21
VPS26B-204ENST00000527586 M0QZQ0 153 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 GFRA2O00451 464 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 P4HBP07237 508 aaKnown RBP7.49□□□□□ -1.21
VPS26B-204ENST00000527586 CSH1P0DML2 217 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 CSH2P0DML3 217 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 HAPLN1P10915 354 aaPredicted RBP7.49□□□□□ -1.21
VPS26B-204ENST00000527586 CKMT1AP12532 417 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 CD99P14209 185 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 RXRGP48443 463 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 GNAQP50148 359 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 NMIQ13287 307 aaPredicted RBP7.49□□□□□ -1.21
VPS26B-204ENST00000527586 MRPL49Q13405 166 aaKnown RBP7.49□□□□□ -1.21
VPS26B-204ENST00000527586 IMMTQ16891 758 aaKnown RBP7.49□□□□□ -1.21
VPS26B-204ENST00000527586 HS1BP3Q53T59 392 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 EEF1DP3Q658K8 133 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 OVOS1Q6IE37 1185 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 TEX2Q8IWB9 1127 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 SCFD1Q8WVM8 642 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 SLC5A5Q92911 643 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 ARRDC3Q96B67 414 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 C5orf34Q96MH7 638 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 ZMAT2Q96NC0 199 aaKnown RBP7.49□□□□□ -1.21
VPS26B-204ENST00000527586 MAP3K14Q99558 947 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 XPNPEP1Q9NQW7 623 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 LATS2Q9NRM7 1088 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 PRMT7Q9NVM4 692 aaPredicted RBP7.49□□□□□ -1.21
VPS26B-204ENST00000527586 ACSL6Q9UKU0 697 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 PPM1HQ9ULR3 514 aa7.49□□□□□ -1.21
VPS26B-204ENST00000527586 ARID1BQ8NFD5 2236 aaPredicted RBP7.49□□□□□ -1.21
VPS26B-204ENST00000527586 ZNF638Q14966 1978 aaKnown RBP7.48□□□□□ -1.21
VPS26B-204ENST00000527586 CCDC187A0A096LP49 1063 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 TMEM200CA6NKL6 621 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 SDC3O75056 442 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 SEMA4FO95754 770 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 GP1BAP07359 652 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 NR1D1P20393 614 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 TGM2P21980 687 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 GLRA2P23416 452 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 CIITAP33076 1130 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 GPR15P49685 360 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 ATF7IP2Q5U623 682 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 SDHAF4Q5VUM1 108 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 GRAMD4Q6IC98 578 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 GDF7Q7Z4P5 450 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 AASDHPPTQ9NRN7 309 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 UXTQ9UBK9 157 aaPredicted RBP7.48□□□□□ -1.21
VPS26B-204ENST00000527586 STON1Q9Y6Q2 735 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 RTTNQ86VV8 2226 aa7.48□□□□□ -1.21
VPS26B-204ENST00000527586 HEATR9A2RTY3 570 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 EFCAB7A8K855 629 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 PRRT4C9JH25 899 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 PSMD10O75832 226 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 CD1EP15812 388 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 CD38P28907 300 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 ARL2P36404 184 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 YARSP54577 528 aaKnown RBP7.47□□□□□ -1.21
VPS26B-204ENST00000527586 NXPH1P58417 271 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 PRPF4BQ13523 1007 aaKnown RBP7.47□□□□□ -1.21
VPS26B-204ENST00000527586 DCAF4L1Q3SXM0 396 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 XKR9Q5GH70 373 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 XKR4Q5GH76 650 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 PPP1R18Q6NYC8 613 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 ALKAL1Q6UXT8 129 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 DSTYKQ6XUX3 929 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 RBM44Q6ZP01 1051 aaKnown RBP7.47□□□□□ -1.21
VPS26B-204ENST00000527586 ZFAND4Q86XD8 727 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 ZNF276Q8N554 614 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 OXR1Q8N573 874 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 KIAA1958Q8N8K9 716 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 OR10T2Q8NGX3 314 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 EVI5LQ96CN4 794 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 TMUB1Q9BVT8 246 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 ABI2Q9NYB9 513 aaPredicted RBP7.47□□□□□ -1.21
VPS26B-204ENST00000527586 WRAP73Q9P2S5 460 aaPredicted RBP7.47□□□□□ -1.21
VPS26B-204ENST00000527586 SLC5A6Q9Y289 635 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 TP53TG5Q9Y2B4 290 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 PCDHB11Q9Y5F2 797 aa7.47□□□□□ -1.21
VPS26B-204ENST00000527586 ARHGEF17Q96PE2 2063 aaPredicted RBP7.47□□□□□ -1.21
VPS26B-204ENST00000527586 A0A1W2PPC4 97 aa7.46□□□□□ -1.22
VPS26B-204ENST00000527586 A0A1W2PR77 199 aa7.46□□□□□ -1.22
VPS26B-204ENST00000527586 LRRIQ4A6NIV6 560 aa7.46□□□□□ -1.22
VPS26B-204ENST00000527586 TCP11X1B4DZS4 312 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms