RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 SIX6OS1Q8N1H7 587 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 CCHCR1Q8TD31 782 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 UBLCP1Q8WVY7 318 aaPredicted RBP16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 SNF8Q96H20 258 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 PCED1BQ96HM7 432 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 TBCBQ99426 244 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 ACBD6Q9BR61 282 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 EPN3Q9H201 632 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 KANSL3Q9P2N6 904 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 DNPEPQ9ULA0 475 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 M0QZQ0 153 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 NDUFAB1O14561 156 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 PPFIA2O75334 1257 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 AP1G2O75843 785 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 BEST1O76090 585 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 MYCP01106 439 aaPredicted RBP16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 CD48P09326 243 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 MYZAPP0CAP1 466 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 DYNLT1P63172 113 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 KRT81Q14533 505 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 PDK2Q15119 407 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 TRIP13Q15645 432 aaPredicted RBP16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 NOMO2Q5JPE7 1267 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 FAM35AQ86V20 835 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 RFX6Q8HWS3 928 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 THEM5Q8N1Q8 247 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 BBOF1Q8ND07 529 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 HASPINQ8TF76 798 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 TEKT4Q8WW24 435 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 RSPH1Q8WYR4 309 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 TMBIM4Q9HC24 238 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 ATP8A1Q9Y2Q0 1164 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 FAM169AQ9Y6X4 670 aa16.93■□□□□ 0.3
SNRNP35-204ENST00000527158 KRT14P02533 472 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 COL6A1P12109 1028 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 MRPS5P82675 430 aaKnown RBP16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 CD300LGQ6UXG3 332 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 LINC01599Q8WXQ3 324 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 NKD2Q969F2 451 aaPredicted RBP16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 FAM149B1Q96BN6 582 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 HAUS1Q96CS2 278 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 DEFB118Q96PH6 123 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 DDX23Q9BUQ8 820 aaKnown RBP16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 PAK6Q9NQU5 681 aaPredicted RBP16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 PLAAQ9Y263 795 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 FBXO21O94952 628 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 MATKP42679 507 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 VCPP55072 806 aaKnown RBP16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 YWHAZP63104 245 aaKnown RBP16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 CAV1Q03135 178 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 RNASELQ05823 741 aaKnown RBP16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 RAB6CQ53S08 254 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 AGBL2Q5U5Z8 902 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 OVOS1Q6IE37 1185 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 CYP4V2Q6ZWL3 525 aaPredicted RBP16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 YTHDF3Q7Z739 585 aaKnown RBP16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 CENPIQ92674 756 aaPredicted RBP16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 SMARCD1Q96GM5 515 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 SUSD3Q96L08 255 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 RAB6CQ9H0N0 254 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 NEU2Q9Y3R4 380 aa16.92■□□□□ 0.3
SNRNP35-204ENST00000527158 KIAA0754O94854 1291 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 ENDOD1O94919 500 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 ITGAVP06756 1048 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 TKTL1P51854 596 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 HDAC4P56524 1084 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 TFDP2Q14188 446 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 SLMAPQ14BN4 828 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 CLLU1OSQ5K130 101 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 FAM193BQ96PV7 902 aaPredicted RBP16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 C11orf84Q9BUA3 381 aaPredicted RBP16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 TMEM161AQ9NX61 479 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 FRMPD3Q5JV73 1810 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 PITPNM1O00562 1244 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 MDM4O15151 490 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 TYMPP19971 482 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 LSP1P33241 339 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 MDH1P40925 334 aaKnown RBP16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 VPS41P49754 854 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 CDR1P51861 262 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 PMS2P54278 862 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 OTUD4Q01804 1114 aaKnown RBP16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 ADCY1Q08828 1119 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 DPYSL3Q14195 570 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 MAPRE1Q15691 268 aaKnown RBP16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 UAP1Q16222 522 aaPredicted RBP16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 INTS6LQ5JSJ4 861 aaKnown RBP16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 CEP85LQ5SZL2 805 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 FAM43BQ6ZT52 329 aaPredicted RBP16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 ALLCQ8N6M5 410 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 ACTL9Q8TC94 416 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 SMOQ99835 787 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 RTP3Q9BQQ7 232 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 TXLNGYQ9BZA5 131 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 RNF208Q9H0X6 261 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 ANAPC5Q9UJX4 755 aa16.91■□□□□ 0.3
SNRNP35-204ENST00000527158 APOC4-APOC2K7ER74 178 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 NBNO60934 754 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms