RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 ABL1P00519 1130 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 CKMP06732 381 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 DDX6P26196 483 aaKnown RBP eCLIP9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 AVPR1AP37288 418 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 ZNF165P49910 485 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 KIF11P52732 1056 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 SLC7A9P82251 487 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 PFKPQ01813 784 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 PRKCQQ04759 706 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 PDE4CQ08493 712 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 GOLGA7BQ2TAP0 167 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 PROX2Q3B8N5 592 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 TRIM65Q6PJ69 517 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 TMEM270Q6UE05 265 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 APTXQ7Z2E3 356 aaKnown RBP9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 PIGZQ86VD9 579 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 MAML2Q8IZL2 1156 aaPredicted RBP9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 PPM1KQ8N3J5 372 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 ANKRD52Q8NB46 1076 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 PJA1Q8NG27 643 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 SH3RF2Q8TEC5 729 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 DNASE1L2Q92874 299 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 IRF7Q92985 503 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 FBXO32Q969P5 355 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 E2F7Q96AV8 911 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 P2RY11Q96G91 374 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 NT5C1BQ96P26 610 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 GCNAQ96QF7 691 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 EBF3Q9H4W6 596 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 CBX8Q9HC52 389 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 LTB4R2Q9NPC1 389 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 UBE2TQ9NPD8 197 aaPredicted RBP9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 FANCLQ9NW38 375 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 SMPD4Q9NXE4 827 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 TRPM5Q9NZQ8 1165 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 NUDT5Q9UKK9 219 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 TSPAN16Q9UKR8 245 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 ARHGAP26Q9UNA1 814 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 SIT1Q9Y3P8 196 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 WNT6Q9Y6F9 365 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 PIAS3Q9Y6X2 628 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 FRYLO94915 3013 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 A0A1W2PQH9 124 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 FAM170BA6NMN3 283 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 KCNJ18B7U540 433 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 H0Y858 1186 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 LEFTY2O00292 366 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 DPYSL4O14531 572 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 MDM4O15151 490 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 RTN3O95197 1032 aaPredicted RBP9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 FGFR1OPO95684 399 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 USP17L7P0C7H9 530 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 PNMA6AP0CW24 399 aaPredicted RBP9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 TBXAS1P24557 533 aaPredicted RBP9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 BRD2P25440 801 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 GCNT1Q02742 428 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 USP4Q13107 963 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 GAS6Q14393 721 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 KCNJ12Q14500 433 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 MTF1Q14872 753 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 UBXN2BQ14CS0 331 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 GAB4Q2WGN9 574 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 VWA3BQ502W6 1294 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 ARHGAP29Q52LW3 1261 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 RAB41Q5JT25 222 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 DTWD2Q8NBA8 298 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 RBBP8NLQ8NC74 664 aaPredicted RBP9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 TTC16Q8NEE8 873 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 EZH1Q92800 747 aaPredicted RBP9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 CLDN23Q96B33 292 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 SLITRK1Q96PX8 696 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 TUBGCP2Q9BSJ2 902 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 UBXN6Q9BZV1 441 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 NAT10Q9H0A0 1025 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 FAM124BQ9H5Z6 455 aaPredicted RBP9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 C2orf42Q9NWW7 574 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 COMMD8Q9NX08 183 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 SCML2Q9UQR0 700 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 PCDHB4Q9Y5E5 795 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 CPQQ9Y646 472 aa9.35□□□□□ -0.91
CCDC90B-208ENST00000527025 ATP8B3O60423 1300 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 CACNA1HO95180 2353 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 SPECC1L-ADORA2AF8WAN1 911 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 PIK3R2O00459 728 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 CAVIN2O95810 425 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 CHRNB1P11230 501 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 VDRP11473 427 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 ATP1A3P13637 1013 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 CD19P15391 556 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 TCF3P15923 654 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 EEF1GP26641 437 aaKnown RBP9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 CTHP32929 405 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 MTIF2P46199 727 aaKnown RBP9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 PPP3CCP48454 512 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 KLK7P49862 253 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 NHLH1Q02575 133 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 MESP2Q0VG99 397 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 RUNX3Q13761 415 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 KRT31Q15323 416 aa9.34□□□□□ -0.91
CCDC90B-208ENST00000527025 MAN2A1Q16706 1144 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms