RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 NR2E1Q9Y466 385 aa21.44■■□□□ 1.02
SMCO4-203ENST00000526869 hCG_1818297A0A087WSY0 165 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 LRRD1A4D1F6 860 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 C3orf70A6NLC5 250 aaPredicted RBP21.43■■□□□ 1.02
SMCO4-203ENST00000526869 ZNF487B1APH4 448 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 TNFRSF10BO14763 440 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 FGBP02675 491 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 CDKN2BP42772 138 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 HDAC4P56524 1084 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 BTG3Q14201 252 aaPredicted RBP21.43■■□□□ 1.02
SMCO4-203ENST00000526869 ATP13A4Q4VNC1 1196 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 ZFYVE27Q5T4F4 411 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 SH3PXD2AQ5TCZ1 1133 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 FBXO38Q6PIJ6 1188 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 MFSD7Q6UXD7 560 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 BHLHA9Q7RTU4 235 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 ZDHHC14Q8IZN3 488 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 RAPGEF5Q92565 580 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 RNF25Q96BH1 459 aaPredicted RBP21.43■■□□□ 1.02
SMCO4-203ENST00000526869 PEBP4Q96S96 227 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 NPY6RQ99463 290 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 HERC2P3Q9BVR0 1158 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 LRRC19Q9H756 370 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 ZWILCHQ9H900 591 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 ABI2Q9NYB9 513 aaPredicted RBP21.43■■□□□ 1.02
SMCO4-203ENST00000526869 STK39Q9UEW8 545 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 PCYOX1Q9UHG3 505 aa21.43■■□□□ 1.02
SMCO4-203ENST00000526869 TCRBV7S2A1N4TA0A589 114 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 FAM187AA6NFU0 413 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 BHMG1C9JSJ3 638 aaPredicted RBP21.42■■□□□ 1.02
SMCO4-203ENST00000526869 MDM4O15151 490 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 RAD51CO43502 376 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 ERLIN1O75477 346 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 TJP3O95049 919 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 LTFP02788 710 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 KDELR1P24390 212 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 CYP2F1P24903 491 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 GRIK1P39086 918 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 ATP11AP98196 1134 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 PDK2Q15119 407 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 CDO1Q16878 200 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 SLC8B1Q6J4K2 584 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 PSRC1Q6PGN9 363 aaPredicted RBP21.42■■□□□ 1.02
SMCO4-203ENST00000526869 C16orf59Q7L2K0 433 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 ADAT2Q7Z6V5 191 aaKnown RBP21.42■■□□□ 1.02
SMCO4-203ENST00000526869 PSTKQ8IV42 348 aaKnown RBP21.42■■□□□ 1.02
SMCO4-203ENST00000526869 GPR65Q8IYL9 337 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 COLGALT1Q8NBJ5 622 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 HNRNPLLQ8WVV9 542 aaKnown RBP21.42■■□□□ 1.02
SMCO4-203ENST00000526869 MAGOHBQ96A72 148 aaKnown RBP21.42■■□□□ 1.02
SMCO4-203ENST00000526869 PCSK1NQ9UHG2 260 aa21.42■■□□□ 1.02
SMCO4-203ENST00000526869 MRPL42Q9Y6G3 142 aaKnown RBP21.42■■□□□ 1.02
SMCO4-203ENST00000526869 PTPRSQ13332 1948 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 YJEFN3A6XGL0 299 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 E7ENQ6 273 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 PI4K2BG5E9Z4 385 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 SLC34A2O95436 690 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 SOD2P04179 222 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 USP17L7P0C7H9 530 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 CPB1P15086 417 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 PPM1AP35813 382 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 SULT1E1P49888 294 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 ARSEP51690 589 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 VSNL1P62760 191 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 HTRA4P83105 476 aaPredicted RBP21.41■■□□□ 1.02
SMCO4-203ENST00000526869 SPOUT1Q5T280 376 aaKnown RBP21.41■■□□□ 1.02
SMCO4-203ENST00000526869 TAS1R1Q7RTX1 841 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 MAP7D3Q8IWC1 876 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 FAM71BQ8TC56 605 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 SLCO2A1Q92959 643 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 PGAP3Q96FM1 320 aaPredicted RBP21.41■■□□□ 1.02
SMCO4-203ENST00000526869 TMEM169Q96HH4 297 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 B3GALT6Q96L58 329 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 CEP295NLQ96MC4 621 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 YME1L1Q96TA2 773 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 HERPUD2Q9BSE4 406 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 VN1R3Q9BXE9 311 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 KLHL11Q9NVR0 708 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 TMEM51Q9NW97 253 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 COMMD8Q9NX08 183 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 SPG21Q9NZD8 308 aa21.41■■□□□ 1.02
SMCO4-203ENST00000526869 DMGDHQ9UI17 866 aaKnown RBP21.41■■□□□ 1.02
SMCO4-203ENST00000526869 MTMR11A4FU01 709 aa21.4■■□□□ 1.02
SMCO4-203ENST00000526869 HEXIM1O94992 359 aaKnown RBP21.4■■□□□ 1.02
SMCO4-203ENST00000526869 FYNP06241 537 aa21.4■■□□□ 1.02
SMCO4-203ENST00000526869 COILP38432 576 aaPredicted RBP21.4■■□□□ 1.02
SMCO4-203ENST00000526869 SLC5A3P53794 718 aa21.4■■□□□ 1.02
SMCO4-203ENST00000526869 PSMD5Q16401 504 aa21.4■■□□□ 1.02
SMCO4-203ENST00000526869 CCNG2Q16589 344 aa21.4■■□□□ 1.02
SMCO4-203ENST00000526869 SMTNL2Q2TAL5 461 aa21.4■■□□□ 1.02
SMCO4-203ENST00000526869 DCAF6Q58WW2 860 aa21.4■■□□□ 1.02
SMCO4-203ENST00000526869 OTUD1Q5VV17 481 aaPredicted RBP21.4■■□□□ 1.02
SMCO4-203ENST00000526869 OTOP2Q7RTS6 562 aa21.4■■□□□ 1.02
SMCO4-203ENST00000526869 IFT20Q8IY31 132 aa21.4■■□□□ 1.02
SMCO4-203ENST00000526869 EIF1ADQ8N9N8 165 aaKnown RBP21.4■■□□□ 1.02
SMCO4-203ENST00000526869 KCTD6Q8NC69 237 aa21.4■■□□□ 1.02
SMCO4-203ENST00000526869 HDAC7Q8WUI4 952 aa21.4■■□□□ 1.02
SMCO4-203ENST00000526869 NDRG1Q92597 394 aaKnown RBP21.4■■□□□ 1.02
SMCO4-203ENST00000526869 BADQ92934 168 aa21.4■■□□□ 1.02
SMCO4-203ENST00000526869 SLC9A7Q96T83 725 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 250.3 ms