RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 AIPL1Q9NZN9 384 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 CAPN11Q9UMQ6 739 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 CEP83Q9Y592 693 aa13.6□□□□□ -0.23
SMPD1-202ENST00000526280 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.6□□□□□ -0.23
SMPD1-202ENST00000526280 PIK3R2O00459 728 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 FBXO21O94952 628 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 PRAMEF12O95522 483 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 LSM8O95777 96 aaKnown RBP13.59□□□□□ -0.23
SMPD1-202ENST00000526280 OLFM2O95897 454 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 GYPCP04921 128 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 VIPR2P41587 438 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 FMO1Q01740 532 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 PDCLQ13371 301 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 HECTD3Q5T447 861 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 SFMBT2Q5VUG0 894 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 VSTM4Q8IW00 320 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 ARHGAP18Q8N392 663 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 SLC44A3Q8N4M1 653 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 ZNF276Q8N554 614 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 TMEM35BQ8NCS4 154 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 C1orf131Q8NDD1 294 aaKnown RBP13.59□□□□□ -0.23
SMPD1-202ENST00000526280 NDRG1Q92597 394 aaKnown RBP13.59□□□□□ -0.23
SMPD1-202ENST00000526280 USP13Q92995 863 aaPredicted RBP13.59□□□□□ -0.23
SMPD1-202ENST00000526280 E2F7Q96AV8 911 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 KXD1Q9BQD3 176 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 PLA2G2FQ9BZM2 168 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 SMG9Q9H0W8 520 aaKnown RBP13.59□□□□□ -0.23
SMPD1-202ENST00000526280 CCSER2Q9H7U1 834 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 ST7Q9NRC1 585 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 TDP1Q9NUW8 608 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 CLIC5Q9NZA1 410 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 BDP1A6H8Y1 2624 aa13.59□□□□□ -0.23
SMPD1-202ENST00000526280 MYO16Q9Y6X6 1858 aa13.58□□□□□ -0.23
SMPD1-202ENST00000526280 E5RJQ4 531 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 COCHO43405 550 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 TLR5O60602 858 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 CKMP06732 381 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 RARGP13631 454 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 DAOAP59103 153 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 YWHAGP61981 247 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMPD1-202ENST00000526280 SLC7A9P82251 487 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 ZBED6P86452 979 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 TDGQ13569 410 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 ZNF268Q14587 947 aaPredicted RBP13.58□□□□□ -0.24
SMPD1-202ENST00000526280 ASIC2Q16515 512 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 E4F1Q66K89 784 aaPredicted RBP13.58□□□□□ -0.24
SMPD1-202ENST00000526280 SCUBE3Q8IX30 993 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 CELF5Q8N6W0 485 aaKnown RBP13.58□□□□□ -0.24
SMPD1-202ENST00000526280 ZNF397Q8NF99 534 aaPredicted RBP13.58□□□□□ -0.24
SMPD1-202ENST00000526280 NUP210Q8TEM1 1887 aaPredicted RBP13.58□□□□□ -0.24
SMPD1-202ENST00000526280 CPLX3Q8WVH0 158 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 IRGQQ8WZA9 623 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 SYN2Q92777 582 aaPredicted RBP13.58□□□□□ -0.24
SMPD1-202ENST00000526280 RSPRY1Q96DX4 576 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 PPP1R13BQ96KQ4 1090 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 NOX5Q96PH1 765 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 CPXM1Q96SM3 734 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 AGPAT1Q99943 283 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 NUCKS1Q9H1E3 243 aaKnown RBP13.58□□□□□ -0.24
SMPD1-202ENST00000526280 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMPD1-202ENST00000526280 OBP2AQ9NY56 170 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 NAGPAQ9UK23 515 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 CCL26Q9Y258 94 aa13.58□□□□□ -0.24
SMPD1-202ENST00000526280 LUC7L2Q9Y383 392 aaKnown RBP13.58□□□□□ -0.24
SMPD1-202ENST00000526280 MUC3AQ02505 3323 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 YJEFN3A6XGL0 299 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 HEPACAM2A8MVW5 462 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 E7ENQ6 273 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 PAPSS1O43252 624 aaPredicted RBP13.57□□□□□ -0.24
SMPD1-202ENST00000526280 TBX18O95935 607 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 CYP1A1P04798 512 aaPredicted RBP13.57□□□□□ -0.24
SMPD1-202ENST00000526280 RALAP11233 206 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 PRKCIP41743 596 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 SNX16P57768 344 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 NOMO3P69849 1222 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 TRIM14Q14142 442 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 PTPN20Q4JDL3 420 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 BSPRYQ5W0U4 402 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 KLHDC10Q6PID8 442 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 VITQ6UXI7 678 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 TRIM72Q6ZMU5 477 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 MFSD6LQ8IWD5 586 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 CLEC4CQ8WTT0 213 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 LRRC3BQ96PB8 259 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 PCDHB18PQ96TA0 734 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 SYT11Q9BT88 431 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 MIS12Q9H081 205 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 KIF9Q9HAQ2 790 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 TJP2Q9UDY2 1190 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 MUTYHQ9UIF7 546 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 ARHGAP26Q9UNA1 814 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 SORCS3Q9UPU3 1222 aa13.57□□□□□ -0.24
SMPD1-202ENST00000526280 DPYSL4O14531 572 aa13.56□□□□□ -0.24
SMPD1-202ENST00000526280 SART1O43290 800 aaKnown RBP13.56□□□□□ -0.24
SMPD1-202ENST00000526280 ERBB2P04626 1255 aa13.56□□□□□ -0.24
SMPD1-202ENST00000526280 TCF3P15923 654 aa13.56□□□□□ -0.24
SMPD1-202ENST00000526280 PSMC3P17980 439 aa13.56□□□□□ -0.24
SMPD1-202ENST00000526280 CASP14P31944 242 aa13.56□□□□□ -0.24
SMPD1-202ENST00000526280 ATP5C1P36542 298 aaKnown RBP13.56□□□□□ -0.24
SMPD1-202ENST00000526280 ZXDBP98169 803 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms