RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 SGK1O00141 431 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 ZNF217O75362 1048 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 AP1G2O75843 785 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 KIF20AO95235 890 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 HSP90AA1P07900 732 aaKnown RBP12.91□□□□□ -0.34
COLCA1-202ENST00000526150 BCKDHBP21953 392 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 SLC5A3P53794 718 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 IRX4P78413 519 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 KDSRQ06136 332 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 EHHADHQ08426 723 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 NCOA4Q13772 614 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 E2F5Q15329 346 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 ANO4Q32M45 955 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 UAP1L1Q3KQV9 507 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 LYSMD4Q5XG99 296 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 UNC93AQ86WB7 457 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 HSCBQ8IWL3 235 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 PARD3BQ8TEW8 1205 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 ZNF516Q92618 1163 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 KCNK16Q96T55 309 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 WDR35Q9P2L0 1181 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 LSM7Q9UK45 103 aaKnown RBP12.91□□□□□ -0.34
COLCA1-202ENST00000526150 CFAP45Q9UL16 551 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 PI4KAP42356 2102 aa12.91□□□□□ -0.34
COLCA1-202ENST00000526150 MYH10P35580 1976 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 TCRBV21S2A2A0A5A6 115 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 FAM92AA1XBS5 289 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 TMEM8BA6NDV4 472 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 CDX4O14627 284 aaPredicted RBP12.9□□□□□ -0.34
COLCA1-202ENST00000526150 NTSR1P30989 418 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 ATP5C1P36542 298 aaKnown RBP12.9□□□□□ -0.34
COLCA1-202ENST00000526150 ME1P48163 572 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 CACNA2D1P54289 1103 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 CLDN10P78369 228 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 DUOXA1Q1HG43 343 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 C10orf76Q5T2E6 689 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 GRAMD4Q6IC98 578 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 SLC23A3Q6PIS1 610 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 SHC4Q6S5L8 630 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 TADA2BQ86TJ2 420 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 SLC9A9Q8IVB4 645 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 TMEFF1Q8IYR6 380 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 TERB1Q8NA31 727 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 TMEM174Q8WUU8 243 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 RLN3Q8WXF3 142 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 IMPG2Q9BZV3 1241 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 SMYD3Q9H7B4 428 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 FOXD4L1Q9NU39 408 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 EXOC1Q9NV70 894 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 NME7Q9Y5B8 376 aa12.9□□□□□ -0.34
COLCA1-202ENST00000526150 GON4LQ3T8J9 2241 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 PATE3B3GLJ2 98 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 IKBKBO14920 756 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 TLR5O60602 858 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 TULP3O75386 442 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 C4BPAP04003 597 aaKnown RBP12.89□□□□□ -0.35
COLCA1-202ENST00000526150 ZDHHC11BP0C7U3 371 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 HOXB2P14652 356 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 AFMP43652 599 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 CDH8P55286 799 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 GFPT1Q06210 699 aaPredicted RBP12.89□□□□□ -0.35
COLCA1-202ENST00000526150 FOXC1Q12948 553 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 MAP7D1Q3KQU3 841 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 EMC10Q5UCC4 262 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 UNQ6494/PRO21346Q6UXR6 183 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 HTR3DQ70Z44 454 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 ACOT1Q86TX2 421 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 C12orf40Q86WS4 652 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 ETFBKMTQ8IXQ9 262 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 CRYBG2Q8N1P7 616 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 HDDC3Q8N4P3 179 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 NAT16Q8N8M0 369 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 SCAMP5Q8TAC9 235 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 TMC2Q8TDI7 906 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 CCDC47Q96A33 483 aaKnown RBP12.89□□□□□ -0.35
COLCA1-202ENST00000526150 ZFRQ96KR1 1074 aaKnown RBP12.89□□□□□ -0.35
COLCA1-202ENST00000526150 BLZF1Q9H2G9 400 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 CCSER2Q9H7U1 834 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 CSNK1G1Q9HCP0 422 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 KRT82Q9NSB4 513 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 TMEM30AQ9NV96 361 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 GMIPQ9P107 970 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 SLC6A14Q9UN76 642 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 FRMD4BQ9Y2L6 1034 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 STARD13Q9Y3M8 1113 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 PLXND1Q9Y4D7 1925 aa12.89□□□□□ -0.35
COLCA1-202ENST00000526150 LRRIQ3A6PVS8 624 aaPredicted RBP12.88□□□□□ -0.35
COLCA1-202ENST00000526150 UPK3BL1B0FP48 263 aa12.88□□□□□ -0.35
COLCA1-202ENST00000526150 UPK3BL2E5RIL1 263 aa12.88□□□□□ -0.35
COLCA1-202ENST00000526150 PDXKO00764 312 aa12.88□□□□□ -0.35
COLCA1-202ENST00000526150 SCAMP3O14828 347 aaKnown RBP12.88□□□□□ -0.35
COLCA1-202ENST00000526150 ADAM23O75077 832 aa12.88□□□□□ -0.35
COLCA1-202ENST00000526150 CFIP05156 583 aa12.88□□□□□ -0.35
COLCA1-202ENST00000526150 MYL1P05976 194 aa12.88□□□□□ -0.35
COLCA1-202ENST00000526150 SYPP08247 313 aa12.88□□□□□ -0.35
COLCA1-202ENST00000526150 FAM200BP0CF97 657 aa12.88□□□□□ -0.35
COLCA1-202ENST00000526150 IRF1P10914 325 aa12.88□□□□□ -0.35
COLCA1-202ENST00000526150 HNRNPLP14866 589 aaKnown RBP eCLIP12.88□□□□□ -0.35
COLCA1-202ENST00000526150 PSEN1P49768 467 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms