RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PNLIPP16233 465 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 KLRC2P26717 231 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 PBX3P40426 434 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 MRPS6P82932 125 aaKnown RBP7.91□□□□□ -1.14
NEDD8-203ENST00000524927 IRF9Q00978 393 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 CREB5Q02930 508 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 ZNF174Q15697 407 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 STXBP2Q15833 593 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 ODR4Q5SWX8 454 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 SLC24A5Q71RS6 500 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 DCP2Q8IU60 420 aaKnown RBP7.91□□□□□ -1.14
NEDD8-203ENST00000524927 PASD1Q8IV76 773 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 NLGN4XQ8N0W4 816 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 ABHD4Q8TB40 342 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 AUTS2Q8WXX7 1259 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 DNASE1L2Q92874 299 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 CD244Q9BZW8 370 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 CRTAC1Q9NQ79 661 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 HEBP1Q9NRV9 189 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 TMEM161AQ9NX61 479 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 H2AFY2Q9P0M6 372 aaPredicted RBP7.91□□□□□ -1.14
NEDD8-203ENST00000524927 PNMA2Q9UL42 364 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 COL5A1P20908 1838 aaPredicted RBP7.91□□□□□ -1.14
NEDD8-203ENST00000524927 ITPR2Q14571 2701 aa7.91□□□□□ -1.14
NEDD8-203ENST00000524927 PLXNB3Q9ULL4 1909 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 ZMYM2Q9UBW7 1377 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 SCDO00767 359 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 SLC27A2O14975 620 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 EFEMP2O95967 443 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 LGALS2P05162 132 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 CCDC192P0DO97 292 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 GLI4P10075 376 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 IL12RB1P42701 662 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 SNAP25P60880 206 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 SEMA3BQ13214 749 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 PLK5Q496M5 336 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 TAF1BQ53T94 588 aaPredicted RBP7.9□□□□□ -1.14
NEDD8-203ENST00000524927 CELF3Q5SZQ8 465 aaKnown RBP7.9□□□□□ -1.14
NEDD8-203ENST00000524927 KCNV1Q6PIU1 500 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 NETO2Q8NC67 525 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 UHMK1Q8TAS1 419 aaKnown RBP7.9□□□□□ -1.14
NEDD8-203ENST00000524927 COG1Q8WTW3 980 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 CLEC4DQ8WXI8 215 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 SEC14L1Q92503 715 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 ZNF707Q96C28 371 aaPredicted RBP7.9□□□□□ -1.14
NEDD8-203ENST00000524927 MTMR8Q96EF0 704 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 IWS1Q96ST2 819 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 PUS7LQ9H0K6 701 aaKnown RBP7.9□□□□□ -1.14
NEDD8-203ENST00000524927 PCIF1Q9H4Z3 704 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 ELAC1Q9H777 363 aaKnown RBP7.9□□□□□ -1.14
NEDD8-203ENST00000524927 RXFP1Q9HBX9 757 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 EMC7Q9NPA0 242 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 MAN1C1Q9NR34 630 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 RGS18Q9NS28 235 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 ATP8A2Q9NTI2 1148 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 NUDT5Q9UKK9 219 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 CDH7Q9ULB5 785 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 ISY1Q9ULR0 285 aaKnown RBP7.9□□□□□ -1.14
NEDD8-203ENST00000524927 ATP23Q9Y6H3 246 aa7.9□□□□□ -1.14
NEDD8-203ENST00000524927 MGAQ8IWI9 3026 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 IGSF9BQ9UPX0 1349 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 IGKV6D-41A0A0C4DH26 115 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 ULK1O75385 1050 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 EIF3JO75822 258 aaKnown RBP7.89□□□□□ -1.15
NEDD8-203ENST00000524927 RHOBTB1O94844 696 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 TTLL1O95922 423 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 CHRNB1P11230 501 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 ITPKBP27987 946 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 SLC1A4P43007 532 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 AFMP43652 599 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 SLC6A11P48066 632 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 FAM189BP81408 668 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 LMAN2Q12907 356 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 ELF2Q15723 593 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 KCNMB1Q16558 191 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 LCE5AQ5TCM9 118 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 CPZQ66K79 652 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 RBM12BQ8IXT5 1001 aaKnown RBP7.89□□□□□ -1.15
NEDD8-203ENST00000524927 SH3RF2Q8TEC5 729 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 HDAC7Q8WUI4 952 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 FAM3CQ92520 227 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 SCYL1Q96KG9 808 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 CASD1Q96PB1 797 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 MAF1Q9H063 256 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 RANBP17Q9H2T7 1088 aaKnown RBP7.89□□□□□ -1.15
NEDD8-203ENST00000524927 MYOTQ9UBF9 498 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 HDAC5Q9UQL6 1122 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 PCNX1Q96RV3 2341 aa7.89□□□□□ -1.15
NEDD8-203ENST00000524927 CYP2D7A0A087X1C5 515 aa7.88□□□□□ -1.15
NEDD8-203ENST00000524927 CCDC194A0A1B0GVG4 234 aa7.88□□□□□ -1.15
NEDD8-203ENST00000524927 ZC3H12DA2A288 527 aaKnown RBP7.88□□□□□ -1.15
NEDD8-203ENST00000524927 MARCH6O60337 910 aa7.88□□□□□ -1.15
NEDD8-203ENST00000524927 CNPP09543 421 aaKnown RBP7.88□□□□□ -1.15
NEDD8-203ENST00000524927 SLC9A1P19634 815 aa7.88□□□□□ -1.15
NEDD8-203ENST00000524927 MTMR1Q13613 665 aa7.88□□□□□ -1.15
NEDD8-203ENST00000524927 LRRC32Q14392 662 aa7.88□□□□□ -1.15
NEDD8-203ENST00000524927 FIGNQ5HY92 759 aa7.88□□□□□ -1.15
NEDD8-203ENST00000524927 EMC4Q5J8M3 183 aa7.88□□□□□ -1.15
NEDD8-203ENST00000524927 KCTD1Q719H9 257 aa7.88□□□□□ -1.15
NEDD8-203ENST00000524927 MILR1Q7Z6M3 343 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms