RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 THAP12O43422 761 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 NCK2O43639 380 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 LILRB3O75022 631 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 DXOO77932 396 aaKnown RBP7.45□□□□□ -1.22
VPS11-201ENST00000524454 PROSCO94903 275 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 EFEMP2O95967 443 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 ITGB3P05106 788 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 NFICP08651 508 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 VDRP11473 427 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 KLRC2P26717 231 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 CHRNA3P32297 505 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 PTPN7P35236 360 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 SCNN1AP37088 669 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 BRCC3P46736 316 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 GABRB2P47870 512 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 FNTAP49354 379 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 GLUD2P49448 558 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 PEX5P50542 639 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 MMP16P51512 607 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 RWDD2BP57060 319 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 SMAD2Q15796 467 aaKnown RBP7.45□□□□□ -1.22
VPS11-201ENST00000524454 CYP1B1Q16678 543 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 LONRF2Q1L5Z9 754 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 WDR72Q3MJ13 1102 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 SPDYCQ5MJ68 293 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 PLA2G2CQ5R387 149 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 FAM171A1Q5VUB5 890 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 TAF3Q5VWG9 929 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 LMBRD2Q68DH5 695 aaPredicted RBP7.45□□□□□ -1.22
VPS11-201ENST00000524454 KIAA1841Q6NSI8 718 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 CD300LGQ6UXG3 332 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 LIMS2Q7Z4I7 341 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 POLNQ7Z5Q5 900 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 ZDHHC17Q8IUH5 632 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 RNF168Q8IYW5 571 aaPredicted RBP7.45□□□□□ -1.22
VPS11-201ENST00000524454 KRT222Q8N1A0 295 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 SMRP1Q8NCR6 262 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 C3orf20Q8ND61 904 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 CCDC26Q8TAB7 109 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 WHAMMQ8TF30 809 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 STK32AQ8WU08 396 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 SLC22A17Q8WUG5 538 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 CAVIN3Q969G5 261 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 HPDLQ96IR7 371 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 FAM84AQ96KN4 292 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 CAPZA3Q96KX2 299 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 PNKPQ96T60 521 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 CDCA3Q99618 268 aaPredicted RBP7.45□□□□□ -1.22
VPS11-201ENST00000524454 S1PR5Q9H228 398 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 MRPL17Q9NRX2 175 aaKnown RBP7.45□□□□□ -1.22
VPS11-201ENST00000524454 RBM12Q9NTZ6 932 aaKnown RBP7.45□□□□□ -1.22
VPS11-201ENST00000524454 SLC38A7Q9NVC3 462 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 GDAP2Q9NXN4 497 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 DPP3Q9NY33 737 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 ADAM22Q9P0K1 906 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 C5orf42Q9H799 3197 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 TSC2P49815 1807 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 MYH10P35580 1976 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 TCRBV5S1A1TA0A578 114 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 FAM86C2PA6NEL3 165 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 FAM187AA6NFU0 413 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 KRIT1O00522 736 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 PODXLO00592 558 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 PPEF2O14830 753 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 ADAM12O43184 909 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 SPOPO43791 374 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 B3GAT3O94766 335 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 TKTP29401 623 aaKnown RBP7.44□□□□□ -1.22
VPS11-201ENST00000524454 LRPAP1P30533 357 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 CETN2P41208 172 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 AARSP49588 968 aaKnown RBP eCLIP7.44□□□□□ -1.22
VPS11-201ENST00000524454 CLCN4P51793 760 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 DRG2P55039 364 aaKnown RBP7.44□□□□□ -1.22
VPS11-201ENST00000524454 VSNL1P62760 191 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 DSG1Q02413 1049 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 ZP2Q05996 745 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 MAMLD1Q13495 774 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 PIGHQ14442 188 aaPredicted RBP7.44□□□□□ -1.22
VPS11-201ENST00000524454 ZNF268Q14587 947 aaPredicted RBP7.44□□□□□ -1.22
VPS11-201ENST00000524454 CNGA2Q16280 664 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 UPP1Q16831 310 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 SEL1L2Q5TEA6 688 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 KIAA0319Q5VV43 1072 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 NAA35Q5VZE5 725 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 SPOPLQ6IQ16 392 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 TMC5Q6UXY8 1006 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 CCNI2Q6ZMN8 369 aaPredicted RBP7.44□□□□□ -1.22
VPS11-201ENST00000524454 SYDE1Q6ZW31 735 aaPredicted RBP7.44□□□□□ -1.22
VPS11-201ENST00000524454 ARCQ7LC44 396 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 VSIG1Q86XK7 387 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 RHOT1Q8IXI2 618 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 KATNAL2Q8IYT4 538 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 GJD3Q8N144 294 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 MREGQ8N565 214 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 AENQ8WTP8 325 aaKnown RBP7.44□□□□□ -1.22
VPS11-201ENST00000524454 CASP10Q92851 521 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 TMEM176AQ96HP8 235 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 EMILIN2Q9BXX0 1053 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 FUT8Q9BYC5 575 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 FRMD8P1Q9BZ68 369 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms