RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	FAM209A	Q5JX71	171 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZMYM1	Q5SVZ6	1142 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	YOD1	Q5VVQ6	348 aa	Predicted RBP	5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	CATIP	Q7Z7H3	387 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	CABP7	Q86V35	215 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	TMEM145	Q8NBT3	493 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	USP33	Q8TEY7	942 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZNF707	Q96C28	371 aa	Predicted RBP	5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	PTCHD1	Q96NR3	888 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	ALPK1	Q96QP1	1244 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	KATNAL1	Q9BW62	490 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	CDADC1	Q9BWV3	514 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	USP44	Q9H0E7	712 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZNF768	Q9H5H4	540 aa	Known RBP	5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	AP5S1	Q9NUS5	200 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	TNFRSF10D	Q9UBN6	386 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	MAFF	Q9ULX9	164 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	PCDHGB3	Q9Y5G1	929 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	ATR	Q13535	2644 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	TACC2	O95359	2948 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	CYP2D7	A0A087X1C5	515 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	PATE3	B3GLJ2	98 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636		J3KRW8	73 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	PLD2	O14939	933 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	SLC28A2	O43868	658 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	CXCL14	O95715	111 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	GH1	P01241	217 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	THBD	P07204	575 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	CR2	P20023	1033 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	RPL10	P27635	214 aa	Known RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	IL15	P40933	162 aa	Predicted RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	UBA7	P41226	1012 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	ECI1	P42126	302 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	KIR2DL1	P43626	348 aa	Predicted RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	KIR2DL2	P43627	348 aa	Predicted RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	CXCL12	P48061	93 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	CCR3	P51677	355 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	CLCN4	P51793	760 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZNF132	P52740	706 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	ITK	Q08881	620 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	TFCP2	Q12800	502 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	TBX2	Q13207	712 aa	Predicted RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.66	□□□□□ -1.5	1e-10	■■□□□ 13.4
PABPC1-223	ENST00000523636	LY6D	Q14210	128 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	MVP	Q14764	893 aa	Known RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	SF1	Q15637	639 aa	Known RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	HSDL1	Q3SXM5	330 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	COBLL1	Q53SF7	1204 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	SPOUT1	Q5T280	376 aa	Known RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	CXorf57	Q6NSI4	855 aa	Known RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	KCNT2	Q6UVM3	1135 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZNF574	Q6ZN55	896 aa	Predicted RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	CEP68	Q76N32	757 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	WDR5B	Q86VZ2	330 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	TMEM173	Q86WV6	379 aa	Predicted RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	NKAP	Q8N5F7	415 aa	Known RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZNF713	Q8N859	430 aa	Predicted RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	GIMAP8	Q8ND71	665 aa	Predicted RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	MAP6	Q96JE9	813 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	G6PC3	Q9BUM1	346 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	VN1R3	Q9BXE9	311 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	MRPL4	Q9BYD3	311 aa	Known RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZBP1	Q9H171	429 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	TMEM9B	Q9NQ34	198 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	SMYD2	Q9NRG4	433 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	HEBP1	Q9NRV9	189 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	SETD4	Q9NVD3	440 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	ERVK13-1	Q9NX77	482 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	TMEM59L	Q9UK28	342 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	FBXO10	Q9UK96	956 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	PHTF1	Q9UMS5	762 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	PCDHGA5	Q9Y5G8	931 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	IRAK3	Q9Y616	596 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	MED13	Q9UHV7	2174 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	HELZ	P42694	1942 aa	Known RBP	5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	NID2	Q14112	1375 aa		5.66	□□□□□ -1.5
PABPC1-223	ENST00000523636	SVIL	O95425	2214 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	CLEC18A	A5D8T8	446 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	SMTNL1	A8MU46	457 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636		H0Y626	953 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	CAPN9	O14815	690 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	MEFV	O15553	781 aa	Predicted RBP	5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	RFPL2	O75678	378 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	RFPL3	O75679	317 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	INMT	O95050	263 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	TRIM16	O95361	564 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZGLP1	P0C6A0	271 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	CHRNB1	P11230	501 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	SCG2	P13521	617 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZSCAN20	P17040	1043 aa	Predicted RBP	5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	NAT1	P18440	290 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	PAM	P19021	973 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	L1CAM	P32004	1257 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	SSR1	P43307	286 aa	Known RBP	5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	SNX16	P57768	344 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	GABRE	P78334	506 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	CHRNE	Q04844	493 aa		5.65	□□□□□ -1.5
PABPC1-223	ENST00000523636	SEMA3B	Q13214	749 aa		5.65	□□□□□ -1.5

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