RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 FOXD4L1Q9NU39 408 aa27.51■■□□□ 1.99
PVT1-219ENST00000523427 KLK13Q9UKR3 277 aa27.51■■□□□ 1.99
PVT1-219ENST00000523427 SRRM3A6NNA2 597 aaPredicted RBP27.5■■□□□ 1.99
PVT1-219ENST00000523427 TGFB1I1O43294 461 aa27.5■■□□□ 1.99
PVT1-219ENST00000523427 AP5Z1O43299 807 aa27.5■■□□□ 1.99
PVT1-219ENST00000523427 GABRG2P18507 467 aa27.5■■□□□ 1.99
PVT1-219ENST00000523427 GFPT1Q06210 699 aaPredicted RBP27.5■■□□□ 1.99
PVT1-219ENST00000523427 CUL4AQ13619 759 aa27.5■■□□□ 1.99
PVT1-219ENST00000523427 COL9A2Q14055 689 aaPredicted RBP27.5■■□□□ 1.99
PVT1-219ENST00000523427 STK38Q15208 465 aa27.5■■□□□ 1.99
PVT1-219ENST00000523427 SCARA5Q6ZMJ2 495 aa27.5■■□□□ 1.99
PVT1-219ENST00000523427 OR2I1PQ8NGU4 316 aa27.5■■□□□ 1.99
PVT1-219ENST00000523427 ZNF507Q8TCN5 953 aa27.5■■□□□ 1.99
PVT1-219ENST00000523427 TRIM9Q9C026 710 aa27.5■■□□□ 1.99
PVT1-219ENST00000523427 LRRC27Q9C0I9 530 aa27.5■■□□□ 1.99
PVT1-219ENST00000523427 TNMDQ9H2S6 317 aa27.5■■□□□ 1.99
PVT1-219ENST00000523427 GMIPQ9P107 970 aa27.5■■□□□ 1.99
PVT1-219ENST00000523427 CALCOCO1Q9P1Z2 691 aa27.5■■□□□ 1.99
PVT1-219ENST00000523427 SLC6A14Q9UN76 642 aa27.5■■□□□ 1.99
PVT1-219ENST00000523427 TMEM8BA6NDV4 472 aa27.49■■□□□ 1.99
PVT1-219ENST00000523427 DUOXA1Q1HG43 343 aa27.49■■□□□ 1.99
PVT1-219ENST00000523427 FAM26FQ5R3K3 315 aa27.49■■□□□ 1.99
PVT1-219ENST00000523427 FAM35AQ86V20 835 aa27.49■■□□□ 1.99
PVT1-219ENST00000523427 ETFBKMTQ8IXQ9 262 aa27.49■■□□□ 1.99
PVT1-219ENST00000523427 XXYLT1Q8NBI6 393 aa27.49■■□□□ 1.99
PVT1-219ENST00000523427 SPHK2Q9NRA0 654 aa27.49■■□□□ 1.99
PVT1-219ENST00000523427 PCNX2A6NKB5 2137 aa27.49■■□□□ 1.99
PVT1-219ENST00000523427 ATP8B3O60423 1300 aa27.48■■□□□ 1.99
PVT1-219ENST00000523427 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.48■■□□□ 1.99
PVT1-219ENST00000523427 EIF3DO15371 548 aaKnown RBP eCLIP27.48■■□□□ 1.99
PVT1-219ENST00000523427 ZBTB24O43167 697 aaPredicted RBP27.48■■□□□ 1.99
PVT1-219ENST00000523427 FAM163BP0C2L3 166 aa27.48■■□□□ 1.99
PVT1-219ENST00000523427 CASP4P49662 377 aa27.48■■□□□ 1.99
PVT1-219ENST00000523427 SLC5A3P53794 718 aa27.48■■□□□ 1.99
PVT1-219ENST00000523427 ZNF33AQ06730 810 aa27.48■■□□□ 1.99
PVT1-219ENST00000523427 SEMA3BQ13214 749 aa27.48■■□□□ 1.99
PVT1-219ENST00000523427 BIRC3Q13489 604 aa27.48■■□□□ 1.99
PVT1-219ENST00000523427 SPDYCQ5MJ68 293 aa27.48■■□□□ 1.99
PVT1-219ENST00000523427 NUDT18Q6ZVK8 323 aa27.48■■□□□ 1.99
PVT1-219ENST00000523427 TRMT11Q7Z4G4 463 aaKnown RBP27.48■■□□□ 1.99
PVT1-219ENST00000523427 MIB1Q86YT6 1006 aa27.48■■□□□ 1.99
PVT1-219ENST00000523427 OTUB2Q96DC9 234 aa27.48■■□□□ 1.99
PVT1-219ENST00000523427 ACOX2Q99424 681 aa27.48■■□□□ 1.99
PVT1-219ENST00000523427 HOXC11O43248 304 aaPredicted RBP27.47■■□□□ 1.99
PVT1-219ENST00000523427 DPP6P42658 865 aa27.47■■□□□ 1.99
PVT1-219ENST00000523427 FAM193AP78312 1265 aa27.47■■□□□ 1.99
PVT1-219ENST00000523427 EGFLAMQ63HQ2 1017 aa27.47■■□□□ 1.99
PVT1-219ENST00000523427 EPM2AIP1Q7L775 607 aaPredicted RBP27.47■■□□□ 1.99
PVT1-219ENST00000523427 TERB1Q8NA31 727 aa27.47■■□□□ 1.99
PVT1-219ENST00000523427 OVCA2Q8WZ82 227 aa27.47■■□□□ 1.99
PVT1-219ENST00000523427 SYAP1Q96A49 352 aaPredicted RBP27.47■■□□□ 1.99
PVT1-219ENST00000523427 XYLT2Q9H1B5 865 aa27.47■■□□□ 1.99
PVT1-219ENST00000523427 DMAP1Q9NPF5 467 aaPredicted RBP27.47■■□□□ 1.99
PVT1-219ENST00000523427 DNAJC17Q9NVM6 304 aaKnown RBP27.47■■□□□ 1.99
PVT1-219ENST00000523427 KBTBD4Q9NVX7 518 aa27.47■■□□□ 1.99
PVT1-219ENST00000523427 HCN2Q9UL51 889 aa27.47■■□□□ 1.99
PVT1-219ENST00000523427 CYP8B1Q9UNU6 501 aa27.47■■□□□ 1.99
PVT1-219ENST00000523427 NEUROG3Q9Y4Z2 214 aa27.47■■□□□ 1.99
PVT1-219ENST00000523427 BAHCC1Q9P281 2608 aa27.47■■□□□ 1.99
PVT1-219ENST00000523427 ADAMTS9Q9P2N4 1935 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 OPHN1O60890 802 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 CASP1P29466 404 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 NTSR1P30989 418 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 AMPD3Q01432 767 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 ORC1Q13415 861 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 PREPLQ4J6C6 727 aaPredicted RBP27.46■■□□□ 1.99
PVT1-219ENST00000523427 GRAMD4Q6IC98 578 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 SLC36A4Q6YBV0 504 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 PAQR9Q6ZVX9 377 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 PIP4P1Q86T03 277 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 CHPFQ8IZ52 775 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 MINDY1Q8N5J2 469 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 CEP76Q8TAP6 659 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 SCFD1Q8WVM8 642 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 KRT82Q9NSB4 513 aa27.46■■□□□ 1.99
PVT1-219ENST00000523427 TFIP11Q9UBB9 837 aaKnown RBP27.46■■□□□ 1.99
PVT1-219ENST00000523427 PKD1L2Q7Z442 2459 aa27.45■■□□□ 1.99
PVT1-219ENST00000523427 ASPMQ8IZT6 3477 aa27.45■■□□□ 1.99
PVT1-219ENST00000523427 NEDD8-MDP1E9PL57 170 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 AP1G2O75843 785 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 SERPINF2P08697 491 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 ATICP31939 592 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 PGFP49763 221 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 E2F4Q16254 413 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 ZNF699Q32M78 642 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 SDE2Q6IQ49 451 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 TPGS1Q6ZTW0 290 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 ACOT1Q86TX2 421 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 CHCHD4Q8N4Q1 142 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 SPRYD3Q8NCJ5 442 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 SMARCD1Q96GM5 515 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 GZF1Q9H116 711 aaPredicted RBP27.45■■□□□ 1.98
PVT1-219ENST00000523427 MTMR6Q9Y217 621 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 RAD54BQ9Y620 910 aa27.45■■□□□ 1.98
PVT1-219ENST00000523427 TNRC6BQ9UPQ9 1833 aaKnown RBP27.45■■□□□ 1.98
PVT1-219ENST00000523427 IGHV1OR15-9A0A0B4J2B8 117 aa27.44■■□□□ 1.98
PVT1-219ENST00000523427 EXOC3O60645 756 aa27.44■■□□□ 1.98
PVT1-219ENST00000523427 TBX18O95935 607 aa27.44■■□□□ 1.98
PVT1-219ENST00000523427 CCDC130P13994 396 aa27.44■■□□□ 1.98
PVT1-219ENST00000523427 ZNF667Q5HYK9 610 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms