RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 GMIPQ9P107 970 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 ARMCX3Q9UH62 379 aaPredicted RBP11.51□□□□□ -0.57
PVT1-216ENST00000523068 SCML2Q9UQR0 700 aa11.51□□□□□ -0.57
PVT1-216ENST00000523068 HRO43593 1189 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 TLR5O60602 858 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 LRP3O75074 770 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 ACO1P21399 889 aaKnown RBP11.5□□□□□ -0.57
PVT1-216ENST00000523068 SDHBP21912 280 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 ATP5C1P36542 298 aaKnown RBP11.5□□□□□ -0.57
PVT1-216ENST00000523068 EIF2DP41214 584 aaKnown RBP11.5□□□□□ -0.57
PVT1-216ENST00000523068 PSEN1P49768 467 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 SLC8A3P57103 927 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 YWHAEP62258 255 aaKnown RBP11.5□□□□□ -0.57
PVT1-216ENST00000523068 FOXK2Q01167 660 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 DMWDQ09019 674 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 DHCR24Q15392 516 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 PREPLQ4J6C6 727 aaPredicted RBP11.5□□□□□ -0.57
PVT1-216ENST00000523068 PPP1R26Q5T8A7 1209 aaPredicted RBP11.5□□□□□ -0.57
PVT1-216ENST00000523068 PKN3Q6P5Z2 889 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 CEP68Q76N32 757 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 SYT13Q7L8C5 426 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.5□□□□□ -0.57
PVT1-216ENST00000523068 TADA2BQ86TJ2 420 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 WHAMMQ8TF30 809 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 SEMA4DQ92854 862 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 ERCC4Q92889 916 aaPredicted RBP11.5□□□□□ -0.57
PVT1-216ENST00000523068 TMEM176AQ96HP8 235 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 HEXIM2Q96MH2 286 aaKnown RBP11.5□□□□□ -0.57
PVT1-216ENST00000523068 METTL14Q9HCE5 456 aaKnown RBP11.5□□□□□ -0.57
PVT1-216ENST00000523068 CISHQ9NSE2 258 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 C2orf42Q9NWW7 574 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 COQ4Q9Y3A0 265 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 OTOGLQ3ZCN5 2332 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 SPAG17Q6Q759 2223 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 WDR87Q6ZQQ6 2873 aa11.5□□□□□ -0.57
PVT1-216ENST00000523068 BICDL2A1A5D9 508 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 TRIM49BA6NDI0 452 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.49□□□□□ -0.57
PVT1-216ENST00000523068 HHLA1C9JL84 531 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 RETP07949 1114 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 ADH5P11766 374 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 OPRD1P41143 372 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 PMS1P54277 932 aaKnown RBP11.49□□□□□ -0.57
PVT1-216ENST00000523068 GAD2Q05329 585 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 LPAL2Q16609 132 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 CBWD6Q4V339 395 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 ZNF394Q53GI3 561 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 CBWD3Q5JTY5 395 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 CBWD5Q5RIA9 395 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 BTBD8Q5XKL5 378 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 NAIF1Q69YI7 327 aaPredicted RBP11.49□□□□□ -0.57
PVT1-216ENST00000523068 NUDT18Q6ZVK8 323 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 ERMP1Q7Z2K6 904 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 JAKMIP2Q96AA8 810 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 ZFRQ96KR1 1074 aaKnown RBP11.49□□□□□ -0.57
PVT1-216ENST00000523068 CEP63Q96MT8 703 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 CDK5RAP1Q96SZ6 601 aaKnown RBP11.49□□□□□ -0.57
PVT1-216ENST00000523068 PNKPQ96T60 521 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 CYLDQ9NQC7 956 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 LSM7Q9UK45 103 aaKnown RBP11.49□□□□□ -0.57
PVT1-216ENST00000523068 MAN1B1Q9UKM7 699 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 USP18Q9UMW8 372 aa11.49□□□□□ -0.57
PVT1-216ENST00000523068 GVINP1Q7Z2Y8 2422 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 PRR5-ARHGAP8B1AHC4 643 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 CYP26A1O43174 497 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 FOXD2O60548 495 aaPredicted RBP11.48□□□□□ -0.57
PVT1-216ENST00000523068 RPP40O75818 363 aaKnown RBP11.48□□□□□ -0.57
PVT1-216ENST00000523068 APBB3O95704 486 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 APODP05090 189 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 CCDC192P0DO97 292 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 TBXAS1P24557 533 aaPredicted RBP11.48□□□□□ -0.57
PVT1-216ENST00000523068 KIF11P52732 1056 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 RAD23BP54727 409 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 MRPS21P82921 87 aaKnown RBP11.48□□□□□ -0.57
PVT1-216ENST00000523068 ARHGAP8P85298 464 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 LMNB2Q03252 620 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 CETN1Q12798 172 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 CUL2Q13617 745 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 DMC1Q14565 340 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 PUM1Q14671 1186 aaKnown RBP eCLIP11.48□□□□□ -0.57
PVT1-216ENST00000523068 GAB4Q2WGN9 574 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 CCDC40Q4G0X9 1142 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 HSF5Q4G112 596 aaPredicted RBP11.48□□□□□ -0.57
PVT1-216ENST00000523068 LY6G5CQ5SRR4 150 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 ARHGAP17Q68EM7 881 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 ISM2Q6H9L7 571 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 KLHDC10Q6PID8 442 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 RHBDF2Q6PJF5 856 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 FOXR2Q6PJQ5 311 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 GPRIN1Q7Z2K8 1008 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 CCDC186Q7Z3E2 898 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 ZNF276Q8N554 614 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 SLC4A11Q8NBS3 891 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 GAB3Q8WWW8 586 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 EZH1Q92800 747 aaPredicted RBP11.48□□□□□ -0.57
PVT1-216ENST00000523068 TATDN2Q93075 761 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 SLC35C1Q96A29 364 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 UBXN6Q9BZV1 441 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 SPHK2Q9NRA0 654 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 DNMT3LQ9UJW3 386 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms