RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 ISCUQ9H1K1 167 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 SLITRK6Q9H5Y7 841 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 PNPLA8Q9NP80 782 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 CDH7Q9ULB5 785 aa12.55□□□□□ -0.4
PVT1-215ENST00000522963 BDP1A6H8Y1 2624 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 FAM86C2PA6NEL3 165 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 SLC38A8A6NNN8 435 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 E5RJQ4 531 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 LCA5LO95447 670 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 LAMP2P13473 410 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 ALADP13716 330 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 LCP1P13796 627 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 CCR2P41597 374 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 ACADSBP45954 432 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 GABRB2P47870 512 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 TKTL1P51854 596 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 USP46P62068 366 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 ADIGQ0VDE8 80 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 TEAD2Q15562 447 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 TOGARAM2Q6ZUX3 1019 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 NPAS3Q8IXF0 933 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 MCOLN2Q8IZK6 566 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 NUP93Q8N1F7 819 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 SCAMP5Q8TAC9 235 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 IPO4Q8TEX9 1081 aaKnown RBP12.54□□□□□ -0.4
PVT1-215ENST00000522963 CEP295NLQ96MC4 621 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 DESI2Q9BSY9 194 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 PACSIN1Q9BY11 444 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 KCNK12Q9HB15 430 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 LRRC4Q9HBW1 653 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 ZNF334Q9HCZ1 680 aaPredicted RBP12.54□□□□□ -0.4
PVT1-215ENST00000522963 CYLDQ9NQC7 956 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 IL37Q9NZH6 218 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 ADAM22Q9P0K1 906 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 REXO2Q9Y3B8 237 aaKnown RBP12.54□□□□□ -0.4
PVT1-215ENST00000522963 ASB3Q9Y575 518 aa12.54□□□□□ -0.4
PVT1-215ENST00000522963 ZNF638Q14966 1978 aaKnown RBP12.54□□□□□ -0.4
PVT1-215ENST00000522963 PTPRDP23468 1912 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 A0A0C4DFX4 3053 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 A0A1W2PRU2 124 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 NRG2O14511 850 aaPredicted RBP12.53□□□□□ -0.4
PVT1-215ENST00000522963 PAPSS1O43252 624 aaPredicted RBP12.53□□□□□ -0.4
PVT1-215ENST00000522963 NRDCO43847 1150 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 HMGA1P17096 107 aaKnown RBP12.53□□□□□ -0.4
PVT1-215ENST00000522963 GABRR2P28476 465 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 MAGEA1P43355 309 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 C1QBPQ07021 282 aaKnown RBP12.53□□□□□ -0.4
PVT1-215ENST00000522963 IFRD2Q12894 506 aaPredicted RBP12.53□□□□□ -0.4
PVT1-215ENST00000522963 SPA17Q15506 151 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 PRSS36Q5K4E3 855 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 PPP1R2P3Q6NXS1 205 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 DENND5BQ6ZUT9 1274 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 FAM183BPQ6ZVS7 135 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 PHLDB2Q86SQ0 1253 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 XYLT1Q86Y38 959 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 SCUBE3Q8IX30 993 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 MSANTD4Q8NCY6 345 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 SHKBP1Q8TBC3 707 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 CLEC4CQ8WTT0 213 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 NDRG1Q92597 394 aaKnown RBP12.53□□□□□ -0.4
PVT1-215ENST00000522963 PSMG2Q969U7 264 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 C18orf8Q96DM3 657 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 GCNAQ96QF7 691 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 KXD1Q9BQD3 176 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 TTLL2Q9BWV7 592 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 ULBP1Q9BZM6 244 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 MIS12Q9H081 205 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 ATXN3LQ9H3M9 355 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 SMOC2Q9H3U7 446 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 SYNCQ9H7C4 482 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 EPS15L1Q9UBC2 864 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 PCDHA13Q9Y5I0 950 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 USP3Q9Y6I4 520 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 C5orf42Q9H799 3197 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 XIRP2A4UGR9 3374 aa12.53□□□□□ -0.4
PVT1-215ENST00000522963 FAM92AA1XBS5 289 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 PI4K2BG5E9Z4 385 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 RTN3O95197 1032 aaPredicted RBP12.52□□□□□ -0.41
PVT1-215ENST00000522963 ZBED1O96006 694 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 CALB1P05937 261 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 H2AFZP0C0S5 128 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 USP17L7P0C7H9 530 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 CSH1P0DML2 217 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 CSH2P0DML3 217 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 ABCB4P21439 1286 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 GALCP54803 685 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 ZXDAP98168 799 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 CYP4F8P98187 520 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 PM20D1Q6GTS8 502 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 OR6B2Q6IFH4 312 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 PARM1Q6UWI2 310 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 OLFML1Q6UWY5 402 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 H2AFVQ71UI9 128 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 BHLHA9Q7RTU4 235 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 TMC8Q8IU68 726 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 SIX6OS1Q8N1H7 587 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 LEMD2Q8NC56 503 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 ZNF653Q96CK0 615 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 ARHGEF26Q96DR7 871 aa12.52□□□□□ -0.41
PVT1-215ENST00000522963 PIWIL1Q96J94 861 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms