RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 FAM228BP0C875 321 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 E2F4Q16254 413 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 AASDHQ4L235 1098 aaPredicted RBP16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 PABPC1LQ4VXU2 614 aaKnown RBP16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 TTI2Q6NXR4 508 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 DENND1BQ6P3S1 775 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 KCNF1Q9H3M0 494 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 TRIM10Q9UDY6 481 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 PCDH8O95206 1070 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 MROH9Q5TGP6 573 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 OTOP1Q7RTM1 612 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 AGGF1Q8N302 714 aaeCLIP16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 TBCBQ99426 244 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 TSEN34Q9BSV6 310 aaKnown RBP16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 DCLK3Q9C098 648 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 AKAP3O75969 853 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 JCHAINP01591 159 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 ENO1P06733 434 aaKnown RBP16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 SERPINF2P08697 491 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 CAPZA2P47755 286 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 C11orf96Q7Z7L8 435 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 CSGALNACT1Q8TDX6 532 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 ADAM2Q99965 735 aa16.79■□□□□ 0.28
PCDHA3-201ENST00000522353 TRPC5OSA6NMA1 111 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 RAMP2O60895 175 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 KCNT1Q5JUK3 1230 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 CES5AQ6NT32 575 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 CEP70Q8NHQ1 597 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 KCNV2Q8TDN2 545 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 KCTD10Q9H3F6 313 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 SYTL2Q9HCH5 934 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 TBC1D13Q9NVG8 400 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 ITSN1Q15811 1721 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 PROSCO94903 275 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 ENO3P13929 434 aaPredicted RBP16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 HLA-DPA1P20036 260 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 RRM1P23921 792 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 ATXN3P54252 364 aaPredicted RBP16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 MARC1Q5VT66 337 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 C16orf89Q6UX73 402 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 BRSK2Q8IWQ3 736 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 TMEM86AQ8N2M4 240 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 ANKRD7Q92527 254 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 CMTM5Q96DZ9 223 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 TMA16Q96EY4 203 aaKnown RBP16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 MARCOQ9UEW3 520 aaPredicted RBP16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 ZW10O43264 779 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 HSPA1AP0DMV8 641 aaKnown RBP16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 HSPA1BP0DMV9 641 aaKnown RBP16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 CASP7P55210 303 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 C1QBPQ07021 282 aaKnown RBP16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 SGCGQ13326 291 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 FAXCQ5TGI0 409 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 TNIP2Q8NFZ5 429 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 HTATIP2Q9BUP3 242 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 TSPAN16Q9UKR8 245 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 KIDINS220Q9ULH0 1771 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 PREX1Q8TCU6 1659 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 TOB1P50616 345 aaPredicted RBP16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 NDST1P52848 882 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 ABRAQ8N0Z2 381 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 E2F7Q96AV8 911 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 PNKPQ96T60 521 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 NPHS2Q9NP85 383 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 MAN1C1Q9NR34 630 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 FBXL21Q9UKT6 434 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 RNF112Q9ULX5 631 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 EIF3LQ9Y262 564 aaKnown RBP16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 MTO1Q9Y2Z2 717 aaKnown RBP16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 SNCAIPQ9Y6H5 919 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 VWDEQ8N2E2 1590 aa16.78■□□□□ 0.28
PCDHA3-201ENST00000522353 TRIM49D1C9J1S8 452 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 IFRD1O00458 451 aaPredicted RBP16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 YWHAZP63104 245 aaKnown RBP16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 TGM3Q08188 693 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 MFSD4BQ5TF39 518 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 POTEAQ6S8J7 498 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 IFNEQ86WN2 208 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 NFKBIZQ9BYH8 718 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 ZCCHC2Q9C0B9 1178 aaKnown RBP16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 DYRK1BQ9Y463 629 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 IRF6O14896 467 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 SLITRK3O94933 977 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 SCNN1BP51168 640 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 CACHD1Q5VU97 1274 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 CCDC149Q6ZUS6 474 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 LZTR1Q8N653 840 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 EXD1Q8NHP7 514 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 NT5MQ9NPB1 228 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 F8VZ95 297 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 MTM1Q13496 603 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 DDX39BQ13838 428 aaKnown RBP16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 DMC1Q14565 340 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 PLCL1Q15111 1095 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 NTRK3Q16288 839 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 PKN1Q16512 942 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 TRAPPC12Q8WVT3 735 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 GPATCH2LQ9NWQ4 482 aa16.77■□□□□ 0.28
PCDHA3-201ENST00000522353 FAM86B1E9PN63 330 aa16.77■□□□□ 0.27
PCDHA3-201ENST00000522353 FAM86B2P0C5J1 330 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms