RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 PLPP4Q5VZY2 271 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 PM20D1Q6GTS8 502 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 SYT10Q6XYQ8 523 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 BEND5Q7L4P6 421 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 PHLDB2Q86SQ0 1253 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 DAAM2Q86T65 1068 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 TCEAL8Q8IYN2 117 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 NUP93Q8N1F7 819 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 MRPL43Q8N983 215 aaKnown RBP13.7□□□□□ -0.22
CPNE3-205ENST00000522240 JOSD2Q8TAC2 188 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.7□□□□□ -0.22
CPNE3-205ENST00000522240 SLC39A7Q92504 469 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 KLHL5Q96PQ7 755 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 NAPGQ99747 312 aaPredicted RBP13.7□□□□□ -0.22
CPNE3-205ENST00000522240 FBXO44Q9H4M3 255 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 IL37Q9NZH6 218 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 EHD2Q9NZN4 543 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 DNAI1Q9UI46 699 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 FBXW11Q9UKB1 542 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 MTUS1Q9ULD2 1270 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 PRUNE2Q8WUY3 3088 aa13.7□□□□□ -0.22
CPNE3-205ENST00000522240 ATG2AQ2TAZ0 1938 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 GREB1Q4ZG55 1949 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 CTAGE9A4FU28 777 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 C2CD4BA6NLJ0 364 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 GJB6O95452 261 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 DESP17661 470 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 ATF6P18850 670 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 GPD1P21695 349 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 CASQ1P31415 396 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 ELF1P32519 619 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 CA8P35219 290 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 RFC1P35251 1148 aaPredicted RBP13.69□□□□□ -0.22
CPNE3-205ENST00000522240 CDR1P51861 262 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 ZNF252P-AS1Q0IIN9 211 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 PLD1Q13393 1074 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 MESDQ14696 234 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 ACAP1Q15027 740 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 DDR2Q16832 855 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 LILRA6Q6PI73 481 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 DENND5BQ6ZUT9 1274 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 RTL10Q7L3V2 364 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 BHLHA9Q7RTU4 235 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 SCUBE3Q8IX30 993 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 CLEC4CQ8WTT0 213 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 KHSRPQ92945 711 aaKnown RBP eCLIP13.69□□□□□ -0.22
CPNE3-205ENST00000522240 SLC2A13Q96QE2 648 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 TTLL2Q9BWV7 592 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 COL25A1Q9BXS0 654 aaPredicted RBP13.69□□□□□ -0.22
CPNE3-205ENST00000522240 TRIM7Q9C029 511 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 SLC28A3Q9HAS3 691 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 CYP4F11Q9HBI6 524 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 SCML2Q9UQR0 700 aa13.69□□□□□ -0.22
CPNE3-205ENST00000522240 MIF4GDA9UHW6 222 aaKnown RBP13.68□□□□□ -0.22
CPNE3-205ENST00000522240 FANCGO15287 622 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 SEC24AO95486 1093 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 GLUD1P00367 558 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 LTFP02788 710 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 USP17L7P0C7H9 530 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 CSH1P0DML2 217 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 CSH2P0DML3 217 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 PSMA2P25787 234 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 FLT3P36888 993 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 PTPN9P43378 593 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 GPR15P49685 360 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 ZNF143P52747 638 aaPredicted RBP13.68□□□□□ -0.22
CPNE3-205ENST00000522240 CAMK1Q14012 370 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 VEPH1Q14D04 833 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 MEI1Q5TIA1 1274 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 CCDC149Q6ZUS6 474 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 PEX26Q7Z412 305 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 NT5DC3Q86UY8 548 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 ARHGAP18Q8N392 663 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 EMC1Q8N766 993 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 KIF18AQ8NI77 898 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 GOLGA1Q92805 767 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 FAM149B1Q96BN6 582 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 TIFAQ96CG3 184 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 BTBD6Q96KE9 485 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 NCAPGQ9BPX3 1015 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 CNPY3Q9BT09 278 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 POPDC2Q9HBU9 364 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 RRN3Q9NYV6 651 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 AMFRQ9UKV5 643 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 SLC27A5Q9Y2P5 690 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 INSL5Q9Y5Q6 135 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 ALG6Q9Y672 507 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 EYSQ5T1H1 3165 aa13.68□□□□□ -0.22
CPNE3-205ENST00000522240 TMEM265A0A087WTH1 108 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 SLC38A8A6NNN8 435 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 HIDE1A8MVS5 230 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 PRRG1O14668 218 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 TGM5O43548 720 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 SPOPO43791 374 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 SOAT2O75908 522 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 FTCDO95954 541 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 C7P10643 843 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 PDGFRAP16234 1089 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 KLRC2P26717 231 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 YWHAQP27348 245 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms