RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 TPGS2Q68CL5 300 aa23.19■■□□□ 1.3
PTP4A3-204ENST00000521578 LILRA6Q6PI73 481 aa23.19■■□□□ 1.3
PTP4A3-204ENST00000521578 SPATA2LQ8IUW3 424 aaPredicted RBP23.19■■□□□ 1.3
PTP4A3-204ENST00000521578 IFT81Q8WYA0 676 aa23.19■■□□□ 1.3
PTP4A3-204ENST00000521578 CYFIP2Q96F07 1278 aa23.19■■□□□ 1.3
PTP4A3-204ENST00000521578 B3GNT5Q9BYG0 378 aa23.19■■□□□ 1.3
PTP4A3-204ENST00000521578 AFF4Q9UHB7 1163 aaKnown RBP23.19■■□□□ 1.3
PTP4A3-204ENST00000521578 CHORDC1Q9UHD1 332 aaPredicted RBP23.19■■□□□ 1.3
PTP4A3-204ENST00000521578 HCFC2Q9Y5Z7 792 aa23.19■■□□□ 1.3
PTP4A3-204ENST00000521578 ESYT3A0FGR9 886 aa23.18■■□□□ 1.3
PTP4A3-204ENST00000521578 PAEPP09466 180 aa23.18■■□□□ 1.3
PTP4A3-204ENST00000521578 ATF2P15336 505 aa23.18■■□□□ 1.3
PTP4A3-204ENST00000521578 SLC2A14Q8TDB8 520 aa23.18■■□□□ 1.3
PTP4A3-204ENST00000521578 SEC14L1Q92503 715 aa23.18■■□□□ 1.3
PTP4A3-204ENST00000521578 KRT35Q92764 455 aa23.18■■□□□ 1.3
PTP4A3-204ENST00000521578 EXOC4Q96A65 974 aa23.18■■□□□ 1.3
PTP4A3-204ENST00000521578 MED10Q9BTT4 135 aa23.18■■□□□ 1.3
PTP4A3-204ENST00000521578 CRISPLD1Q9H336 500 aa23.18■■□□□ 1.3
PTP4A3-204ENST00000521578 ADAM21Q9UKJ8 722 aa23.18■■□□□ 1.3
PTP4A3-204ENST00000521578 SLC27A5Q9Y2P5 690 aa23.18■■□□□ 1.3
PTP4A3-204ENST00000521578 PCDHB5Q9Y5E4 795 aa23.18■■□□□ 1.3
PTP4A3-204ENST00000521578 PCDHA3Q9Y5H8 950 aa23.18■■□□□ 1.3
PTP4A3-204ENST00000521578 CCDC66A2RUB6 948 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 GOLGA6BA6NDN3 693 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 TMEM110-MUSTN1A8MSY1 372 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 SEC24AO95486 1093 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 FOSL2P15408 326 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 BRD2P25440 801 aaKnown RBP23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 ADORA2BP29275 332 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 CTNNA1P35221 906 aaKnown RBP23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 GGCXP38435 758 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 DUSP4Q13115 394 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 SGO2Q562F6 1265 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 PPP1R26Q5T8A7 1209 aaPredicted RBP23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 PPP1R2P3Q6NXS1 205 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 C4orf50Q6ZRC1 276 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 FUKQ8N0W3 1084 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 TTC9BQ8N6N2 239 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 SLC22A17Q8WUG5 538 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 TFAP2BQ92481 460 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 CYP4F11Q9HBI6 524 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 PSD3Q9NYI0 1048 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 VPS18Q9P253 973 aa23.17■■□□□ 1.3
PTP4A3-204ENST00000521578 VDRP11473 427 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 BDNFP23560 247 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 GNA15P30679 374 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 ELF1P32519 619 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 SSTR3P32745 418 aaPredicted RBP23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 ZNF211Q13398 564 aaPredicted RBP23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 TSEN2Q8NCE0 465 aaKnown RBP23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 KREMEN2Q8NCW0 462 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 VN1R2Q8NFZ6 395 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 CDCA3Q99618 268 aaPredicted RBP23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 ZNF518BQ9C0D4 1074 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 FBXW11Q9UKB1 542 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 NR2E1Q9Y466 385 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 GOLGA6L10A0A0M3HER8 536 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 PRRG1O14668 218 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 FAM153BP0C7A2 387 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 CYP2F1P24903 491 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 SMARCB1Q12824 385 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 TRADDQ15628 312 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 FAM153CQ494X1 144 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 PAQR9Q6ZVX9 377 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 SPPL2BQ8TCT7 592 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 VCPIP1Q96JH7 1222 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 PLEKHA4Q9H4M7 779 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 MAN1C1Q9NR34 630 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.16■■□□□ 1.31e-6■■■□□ 17.6
PTP4A3-204ENST00000521578 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 AMACRQ9UHK6 382 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 FAM153AQ9UHL3 310 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 KIAA1257Q9ULG3 409 aa23.16■■□□□ 1.3
PTP4A3-204ENST00000521578 LINC01565O15544 149 aa23.15■■□□□ 1.3
PTP4A3-204ENST00000521578 THAP12O43422 761 aa23.15■■□□□ 1.3
PTP4A3-204ENST00000521578 SOAT2O75908 522 aa23.15■■□□□ 1.3
PTP4A3-204ENST00000521578 ECHS1P30084 290 aa23.15■■□□□ 1.3
PTP4A3-204ENST00000521578 NSFP46459 744 aaKnown RBP23.15■■□□□ 1.3
PTP4A3-204ENST00000521578 MARCKSL1P49006 195 aa23.15■■□□□ 1.3
PTP4A3-204ENST00000521578 CCDC85BQ15834 202 aaPredicted RBP23.15■■□□□ 1.3
PTP4A3-204ENST00000521578 MON1BQ7L1V2 547 aa23.15■■□□□ 1.3
PTP4A3-204ENST00000521578 C2orf15Q8WU43 125 aaKnown RBP23.15■■□□□ 1.3
PTP4A3-204ENST00000521578 SEPT5Q99719 369 aaPredicted RBP23.15■■□□□ 1.3
PTP4A3-204ENST00000521578 SH3GL2Q99962 352 aa23.15■■□□□ 1.3
PTP4A3-204ENST00000521578 MTCL1Q9Y4B5 1905 aaKnown RBP23.15■■□□□ 1.3
PTP4A3-204ENST00000521578 SPOPO43791 374 aa23.14■■□□□ 1.3
PTP4A3-204ENST00000521578 RNF40O75150 1001 aa23.14■■□□□ 1.3
PTP4A3-204ENST00000521578 MGAT5BQ3V5L5 792 aa23.14■■□□□ 1.3
PTP4A3-204ENST00000521578 NAA35Q5VZE5 725 aa23.14■■□□□ 1.3
PTP4A3-204ENST00000521578 FAM35AQ86V20 835 aa23.14■■□□□ 1.3
PTP4A3-204ENST00000521578 PHF13Q86YI8 300 aaPredicted RBP23.14■■□□□ 1.3
PTP4A3-204ENST00000521578 SLC7A14Q8TBB6 771 aa23.14■■□□□ 1.3
PTP4A3-204ENST00000521578 CPA5Q8WXQ8 436 aa23.14■■□□□ 1.3
PTP4A3-204ENST00000521578 FUBP3Q96I24 572 aaKnown RBP eCLIP23.14■■□□□ 1.3
PTP4A3-204ENST00000521578 BTBD6Q96KE9 485 aa23.14■■□□□ 1.3
PTP4A3-204ENST00000521578 HNRNPABQ99729 332 aaKnown RBP23.14■■□□□ 1.3
PTP4A3-204ENST00000521578 GYS2P54840 703 aa23.13■■□□□ 1.29
PTP4A3-204ENST00000521578 NOMO3P69849 1222 aa23.13■■□□□ 1.29
PTP4A3-204ENST00000521578 KCNC3Q14003 757 aa23.13■■□□□ 1.29
PTP4A3-204ENST00000521578 LIN9Q5TKA1 542 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms