RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 C1orf228Q6PIY5 440 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 LCLAT1Q6UWP7 414 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 ENOSF1Q7L5Y1 443 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 CCDC186Q7Z3E2 898 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 LINC00597Q9H2U6 94 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 CYLDQ9NQC7 956 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 CFAP97Q9P2B7 532 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 MYH10P35580 1976 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 H0Y858 1186 aa21.74■■□□□ 1.07
TRIM35-203ENST00000521253 NCAM2O15394 837 aa21.74■■□□□ 1.07
TRIM35-203ENST00000521253 TBX18O95935 607 aa21.74■■□□□ 1.07
TRIM35-203ENST00000521253 KRT5P13647 590 aa21.74■■□□□ 1.07
TRIM35-203ENST00000521253 EEF1GP26641 437 aaKnown RBP21.74■■□□□ 1.07
TRIM35-203ENST00000521253 MFAP3P55082 362 aa21.74■■□□□ 1.07
TRIM35-203ENST00000521253 NHLH1Q02575 133 aa21.74■■□□□ 1.07
TRIM35-203ENST00000521253 CNGA2Q16280 664 aa21.74■■□□□ 1.07
TRIM35-203ENST00000521253 SCD5Q86SK9 330 aa21.74■■□□□ 1.07
TRIM35-203ENST00000521253 DDX42Q86XP3 938 aaKnown RBP eCLIP21.74■■□□□ 1.07
TRIM35-203ENST00000521253 ATP2A3Q93084 1043 aa21.74■■□□□ 1.07
TRIM35-203ENST00000521253 NACA2Q9H009 215 aa21.74■■□□□ 1.07
TRIM35-203ENST00000521253 ECT2Q9H8V3 914 aa21.74■■□□□ 1.07
TRIM35-203ENST00000521253 NAGPAQ9UK23 515 aa21.74■■□□□ 1.07
TRIM35-203ENST00000521253 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.74■■□□□ 1.07
TRIM35-203ENST00000521253 SCAMP3O14828 347 aaKnown RBP21.73■■□□□ 1.07
TRIM35-203ENST00000521253 SETSIPP0DME0 302 aa21.73■■□□□ 1.07
TRIM35-203ENST00000521253 PLA2G5P39877 138 aa21.73■■□□□ 1.07
TRIM35-203ENST00000521253 RPS9P46781 194 aaKnown RBP21.73■■□□□ 1.07
TRIM35-203ENST00000521253 PLA2G4AP47712 749 aa21.73■■□□□ 1.07
TRIM35-203ENST00000521253 TKTL1P51854 596 aa21.73■■□□□ 1.07
TRIM35-203ENST00000521253 ANGPT1Q15389 498 aa21.73■■□□□ 1.07
TRIM35-203ENST00000521253 STILQ15468 1287 aa21.73■■□□□ 1.07
TRIM35-203ENST00000521253 CDKAL1Q5VV42 579 aa21.73■■□□□ 1.07
TRIM35-203ENST00000521253 CPA6Q8N4T0 437 aa21.73■■□□□ 1.07
TRIM35-203ENST00000521253 KIAA1958Q8N8K9 716 aa21.73■■□□□ 1.07
TRIM35-203ENST00000521253 CHFRQ96EP1 664 aa21.73■■□□□ 1.07
TRIM35-203ENST00000521253 FAM81BQ96LP2 452 aa21.73■■□□□ 1.07
TRIM35-203ENST00000521253 SIX2Q9NPC8 291 aa21.73■■□□□ 1.07
TRIM35-203ENST00000521253 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.73■■□□□ 1.07
TRIM35-203ENST00000521253 M0QYV0 167 aa21.72■■□□□ 1.07
TRIM35-203ENST00000521253 RARGP13631 454 aa21.72■■□□□ 1.07
TRIM35-203ENST00000521253 MAGEA9P43362 315 aa21.72■■□□□ 1.07
TRIM35-203ENST00000521253 PSEN1P49768 467 aa21.72■■□□□ 1.07
TRIM35-203ENST00000521253 PON2Q15165 354 aa21.72■■□□□ 1.07
TRIM35-203ENST00000521253 ARHGAP44Q17R89 818 aa21.72■■□□□ 1.07
TRIM35-203ENST00000521253 CAVIN1Q6NZI2 390 aaKnown RBP21.72■■□□□ 1.07
TRIM35-203ENST00000521253 FAM122AQ96E09 287 aa21.72■■□□□ 1.07
TRIM35-203ENST00000521253 ULBP1Q9BZM6 244 aa21.72■■□□□ 1.07
TRIM35-203ENST00000521253 LMAN1LQ9HAT1 526 aa21.72■■□□□ 1.07
TRIM35-203ENST00000521253 LRRC4Q9HBW1 653 aa21.72■■□□□ 1.07
TRIM35-203ENST00000521253 FANCLQ9NW38 375 aa21.72■■□□□ 1.07
TRIM35-203ENST00000521253 TAB2Q9NYJ8 693 aa21.72■■□□□ 1.07
TRIM35-203ENST00000521253 NUDT5Q9UKK9 219 aa21.72■■□□□ 1.07
TRIM35-203ENST00000521253 BECN2A8MW95 431 aa21.71■■□□□ 1.07
TRIM35-203ENST00000521253 PES1O00541 588 aaKnown RBP21.71■■□□□ 1.07
TRIM35-203ENST00000521253 ZBED1O96006 694 aa21.71■■□□□ 1.07
TRIM35-203ENST00000521253 CHRNB1P11230 501 aa21.71■■□□□ 1.07
TRIM35-203ENST00000521253 GJA4P35212 333 aa21.71■■□□□ 1.07
TRIM35-203ENST00000521253 ATP5C1P36542 298 aaKnown RBP21.71■■□□□ 1.07
TRIM35-203ENST00000521253 TYRO3Q06418 890 aa21.71■■□□□ 1.07
TRIM35-203ENST00000521253 ADIGQ0VDE8 80 aa21.71■■□□□ 1.07
TRIM35-203ENST00000521253 C1orf210Q8IVY1 113 aa21.71■■□□□ 1.07
TRIM35-203ENST00000521253 SLC35F5Q8WV83 523 aa21.71■■□□□ 1.07
TRIM35-203ENST00000521253 KCTD13Q8WZ19 329 aa21.71■■□□□ 1.07
TRIM35-203ENST00000521253 SECISBP2LQ93073 1101 aaKnown RBP21.71■■□□□ 1.07
TRIM35-203ENST00000521253 WBP2Q969T9 261 aa21.71■■□□□ 1.07
TRIM35-203ENST00000521253 ACP6Q9NPH0 428 aa21.71■■□□□ 1.07
TRIM35-203ENST00000521253 SPATA6Q9NWH7 488 aaPredicted RBP21.71■■□□□ 1.07
TRIM35-203ENST00000521253 CLIC5Q9NZA1 410 aa21.71■■□□□ 1.07
TRIM35-203ENST00000521253 AJAP1Q9UKB5 411 aaPredicted RBP21.71■■□□□ 1.07
TRIM35-203ENST00000521253 HELZP42694 1942 aaKnown RBP21.7■■□□□ 1.07
TRIM35-203ENST00000521253 E2F8A0AVK6 867 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 SLC9A3R1O14745 358 aaPredicted RBP21.7■■□□□ 1.06
TRIM35-203ENST00000521253 MDM4O15151 490 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 NFATC1O95644 943 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 USP8P40818 1118 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 RGS7P49802 495 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 MYL5Q02045 173 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 C10orf120Q5SQS8 335 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 PM20D1Q6GTS8 502 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 DPY19L2P1Q6NXN4 242 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 PMF1Q6P1K2 205 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 KLHDC10Q6PID8 442 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 BHLHA9Q7RTU4 235 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 SHC3Q92529 594 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 NDRG1Q92597 394 aaKnown RBP21.7■■□□□ 1.06
TRIM35-203ENST00000521253 ATOH1Q92858 354 aaPredicted RBP21.7■■□□□ 1.06
TRIM35-203ENST00000521253 KLF16Q9BXK1 252 aaPredicted RBP21.7■■□□□ 1.06
TRIM35-203ENST00000521253 IRF2BPLQ9H1B7 796 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 CHRDQ9H2X0 955 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 RBM12Q9NTZ6 932 aaKnown RBP21.7■■□□□ 1.06
TRIM35-203ENST00000521253 SH3BP1Q9Y3L3 701 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 VPS13AQ96RL7 3174 aa21.7■■□□□ 1.06
TRIM35-203ENST00000521253 MYO16Q9Y6X6 1858 aa21.69■■□□□ 1.06
TRIM35-203ENST00000521253 MIA3Q5JRA6 1907 aa21.69■■□□□ 1.06
TRIM35-203ENST00000521253 LETM1O95202 739 aaPredicted RBP21.69■■□□□ 1.06
TRIM35-203ENST00000521253 IRF1P10914 325 aa21.69■■□□□ 1.06
TRIM35-203ENST00000521253 RALAP11233 206 aa21.69■■□□□ 1.06
TRIM35-203ENST00000521253 YWHAGP61981 247 aaKnown RBP eCLIP21.69■■□□□ 1.06
TRIM35-203ENST00000521253 AMPD2Q01433 879 aa21.69■■□□□ 1.06
TRIM35-203ENST00000521253 KCNMA1Q12791 1236 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 337.7 ms