RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 NUCB2P80303 420 aa16.72■□□□□ 0.27
CLN8-205ENST00000520991 CSRP2Q16527 193 aa16.72■□□□□ 0.27
CLN8-205ENST00000520991 RHBDF2Q6PJF5 856 aa16.72■□□□□ 0.27
CLN8-205ENST00000520991 CLEC20AQ6ZU45 233 aa16.72■□□□□ 0.27
CLN8-205ENST00000520991 KBTBD6Q86V97 674 aa16.72■□□□□ 0.27
CLN8-205ENST00000520991 TSTD1Q8NFU3 115 aa16.72■□□□□ 0.27
CLN8-205ENST00000520991 USP33Q8TEY7 942 aa16.72■□□□□ 0.27
CLN8-205ENST00000520991 OTUB2Q96DC9 234 aa16.72■□□□□ 0.27
CLN8-205ENST00000520991 PNKPQ96T60 521 aa16.72■□□□□ 0.27
CLN8-205ENST00000520991 HNRNPABQ99729 332 aaKnown RBP16.72■□□□□ 0.27
CLN8-205ENST00000520991 TSG101Q99816 390 aa16.72■□□□□ 0.27
CLN8-205ENST00000520991 MYH10P35580 1976 aa16.72■□□□□ 0.27
CLN8-205ENST00000520991 CACNA1AO00555 2505 aa16.72■□□□□ 0.27
CLN8-205ENST00000520991 MYO16Q9Y6X6 1858 aa16.72■□□□□ 0.27
CLN8-205ENST00000520991 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.71■□□□□ 0.27
CLN8-205ENST00000520991 SMC2O95347 1197 aa16.71■□□□□ 0.27
CLN8-205ENST00000520991 APODP05090 189 aa16.71■□□□□ 0.27
CLN8-205ENST00000520991 PRCPP42785 496 aa16.71■□□□□ 0.27
CLN8-205ENST00000520991 SLC6A11P48066 632 aa16.71■□□□□ 0.27
CLN8-205ENST00000520991 LY6G5CQ5SRR4 150 aa16.71■□□□□ 0.27
CLN8-205ENST00000520991 BTBD8Q5XKL5 378 aa16.71■□□□□ 0.27
CLN8-205ENST00000520991 PRR23CQ6ZRP0 262 aa16.71■□□□□ 0.27
CLN8-205ENST00000520991 GPRIN1Q7Z2K8 1008 aa16.71■□□□□ 0.27
CLN8-205ENST00000520991 FBXL13Q8NEE6 735 aa16.71■□□□□ 0.27
CLN8-205ENST00000520991 LOXL4Q96JB6 756 aa16.71■□□□□ 0.27
CLN8-205ENST00000520991 HOOK1Q9UJC3 728 aaKnown RBP16.71■□□□□ 0.27
CLN8-205ENST00000520991 SCML2Q9UQR0 700 aa16.71■□□□□ 0.27
CLN8-205ENST00000520991 PCDHA5Q9Y5H7 936 aa16.71■□□□□ 0.27
CLN8-205ENST00000520991 KIAA1549LQ6ZVL6 1849 aa16.71■□□□□ 0.27
CLN8-205ENST00000520991 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.7■□□□□ 0.26
CLN8-205ENST00000520991 CYP26A1O43174 497 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 FOXD2O60548 495 aaPredicted RBP16.7■□□□□ 0.26
CLN8-205ENST00000520991 KAT7O95251 611 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 ACO1P21399 889 aaKnown RBP16.7■□□□□ 0.26
CLN8-205ENST00000520991 PGFP49763 221 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 DGKEP52429 567 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 ATXN1P54253 815 aaKnown RBP16.7■□□□□ 0.26
CLN8-205ENST00000520991 GAD2Q05329 585 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 KDSRQ06136 332 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 GOLGA8FQ08AF8 430 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 GOLGA8DPQ0D2H9 430 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 ZNF394Q53GI3 561 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 DCAF17Q5H9S7 520 aaPredicted RBP16.7■□□□□ 0.26
CLN8-205ENST00000520991 ZNF658Q5TYW1 1059 aaPredicted RBP16.7■□□□□ 0.26
CLN8-205ENST00000520991 TCERG1LQ5VWI1 586 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 C12orf40Q86WS4 652 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 BBS7Q8IWZ6 715 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 TTC39CQ8N584 583 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 CCDC33Q8N5R6 958 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 NETO1Q8TDF5 533 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 SEMA4DQ92854 862 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 SMARCE1Q969G3 411 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 GSDMAQ96QA5 445 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 RTKNQ9BST9 563 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 ARRDC1-AS1Q9H2J1 176 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 PNPLA8Q9NP80 782 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 ARHGEF4Q9NR80 690 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 RAB20Q9NX57 234 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 EBF1Q9UH73 591 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 MED19A0JLT2 244 aaPredicted RBP16.7■□□□□ 0.26
CLN8-205ENST00000520991 MRPS21P82921 87 aaKnown RBP16.7■□□□□ 0.26
CLN8-205ENST00000520991 ELF2Q15723 593 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 ANO4Q32M45 955 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 PREPLQ4J6C6 727 aaPredicted RBP16.7■□□□□ 0.26
CLN8-205ENST00000520991 PPP1R26Q5T8A7 1209 aaPredicted RBP16.7■□□□□ 0.26
CLN8-205ENST00000520991 WHAMMQ8TF30 809 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 FAXDC2Q96IV6 333 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 HEXIM2Q96MH2 286 aaKnown RBP16.7■□□□□ 0.26
CLN8-205ENST00000520991 CYLDQ9NQC7 956 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 SPHK2Q9NRA0 654 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 LSM7Q9UK45 103 aaKnown RBP16.7■□□□□ 0.26
CLN8-205ENST00000520991 MMP17Q9ULZ9 603 aa16.7■□□□□ 0.26
CLN8-205ENST00000520991 A0A1W2PQH9 124 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 HHLA1C9JL84 531 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 SLC16A3O15427 465 aaKnown RBP16.69■□□□□ 0.26
CLN8-205ENST00000520991 EPN2O95208 641 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 TBX18O95935 607 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 TIE1P35590 1138 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 ATP5C1P36542 298 aaKnown RBP16.69■□□□□ 0.26
CLN8-205ENST00000520991 GRIA2P42262 883 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 FKBP3Q00688 224 aaKnown RBP16.69■□□□□ 0.26
CLN8-205ENST00000520991 MESP2Q0VG99 397 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 CCDC6Q16204 474 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 AASDHQ4L235 1098 aaPredicted RBP16.69■□□□□ 0.26
CLN8-205ENST00000520991 COBLL1Q53SF7 1204 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 ANO7Q6IWH7 933 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 TTC30AQ86WT1 665 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 SFTPA1Q8IWL2 248 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 ALLCQ8N6M5 410 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 NAT16Q8N8M0 369 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 C12orf50Q8NA57 414 aaPredicted RBP16.69■□□□□ 0.26
CLN8-205ENST00000520991 ERCC4Q92889 916 aaPredicted RBP16.69■□□□□ 0.26
CLN8-205ENST00000520991 ZC3H10Q96K80 434 aaKnown RBP16.69■□□□□ 0.26
CLN8-205ENST00000520991 DUSP9Q99956 384 aaKnown RBP16.69■□□□□ 0.26
CLN8-205ENST00000520991 DUSP16Q9BY84 665 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 GTPBP4Q9BZE4 634 aaKnown RBP16.69■□□□□ 0.26
CLN8-205ENST00000520991 CISHQ9NSE2 258 aa16.69■□□□□ 0.26
CLN8-205ENST00000520991 RALGAPA1Q6GYQ0 2036 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 DCDC2BA2VCK2 349 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 TBC1D3BA6NDS4 549 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms