RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 NADK2Q4G0N4 442 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 DNAL1Q4LDG9 190 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 MEX3CQ5U5Q3 659 aaKnown RBP9□□□□□ -0.97
SHPRH-208ENST00000520752 AGAP9Q5VTM2 703 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 DUPD1Q68J44 220 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 CTRB2Q6GPI1 263 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 DCLRE1AQ6PJP8 1040 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 KYAT3Q6YP21 454 aaKnown RBP9□□□□□ -0.97
SHPRH-208ENST00000520752 STOX1Q6ZVD7 989 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 FASTKD5Q7L8L6 764 aaKnown RBP9□□□□□ -0.97
SHPRH-208ENST00000520752 UBE3DQ7Z6J8 389 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 LRRC6Q86X45 466 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 ANKRD35Q8N283 1001 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 CENPSQ8N2Z9 138 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 CPSF7Q8N684 471 aaKnown RBP9□□□□□ -0.97
SHPRH-208ENST00000520752 CCDC89Q8N998 374 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 ZFP28Q8NHY6 868 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 JADE3Q92613 823 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 ESR2Q92731 530 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 CCDC127Q96BQ5 260 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 COG3Q96JB2 828 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 TMEM87BQ96K49 555 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 PSMG3-AS1Q96PY0 264 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 PSKH2Q96QS6 385 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 SHCBP1LQ9BZQ2 653 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 NEUROG2Q9H2A3 272 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 NCOA5Q9HCD5 579 aaKnown RBP9□□□□□ -0.97
SHPRH-208ENST00000520752 TCF7L2Q9NQB0 619 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 DIABLOQ9NR28 239 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 ZDHHC18Q9NUE0 388 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 DDX18Q9NVP1 670 aaKnown RBP9□□□□□ -0.97
SHPRH-208ENST00000520752 THAP1Q9NVV9 213 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 DBF4Q9UBU7 674 aaPredicted RBP9□□□□□ -0.97
SHPRH-208ENST00000520752 LGALS13Q9UHV8 139 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 ATPIF1Q9UII2 106 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 RAB26Q9ULW5 256 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 PPT2Q9UMR5 302 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 DNAJC16Q9Y2G8 782 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 ZNF536O15090 1300 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 C4AP0C0L4 1744 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 C4BP0C0L5 1744 aa9□□□□□ -0.97
SHPRH-208ENST00000520752 DDX60Q8IY21 1712 aaKnown RBP9□□□□□ -0.97
SHPRH-208ENST00000520752 MYH10P35580 1976 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 MAP2P11137 1827 aaKnown RBP8.99□□□□□ -0.97
SHPRH-208ENST00000520752 E7EWF7 191 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 AP3B1O00203 1094 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 PODXLO00592 558 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 CASQ2O14958 399 aaPredicted RBP8.99□□□□□ -0.97
SHPRH-208ENST00000520752 DYNC1LI2O43237 492 aaPredicted RBP8.99□□□□□ -0.97
SHPRH-208ENST00000520752 NCK2O43639 380 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 ITM2AO43736 263 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 SGTAO43765 313 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 PALMO75781 387 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 LDHCP07864 332 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 ABCB1P08183 1280 aaPredicted RBP8.99□□□□□ -0.97
SHPRH-208ENST00000520752 ENO2P09104 434 aaPredicted RBP8.99□□□□□ -0.97
SHPRH-208ENST00000520752 CD48P09326 243 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 HMOX1P09601 288 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 FGRP09769 529 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 P4HA1P13674 534 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 CDH2P19022 906 aaPredicted RBP8.99□□□□□ -0.97
SHPRH-208ENST00000520752 DNAJA1P31689 397 aaKnown RBP8.99□□□□□ -0.97
SHPRH-208ENST00000520752 CSTF2P33240 577 aaKnown RBP eCLIP8.99□□□□□ -0.97
SHPRH-208ENST00000520752 VCPP55072 806 aaKnown RBP8.99□□□□□ -0.97
SHPRH-208ENST00000520752 C21orf59P57076 290 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 ACTR3P61158 418 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 CDK18Q07002 472 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 C16orf72Q14CZ0 275 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 MMEL1Q495T6 779 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 CERKLQ49MI3 558 aaPredicted RBP8.99□□□□□ -0.97
SHPRH-208ENST00000520752 OTUD7BQ6GQQ9 843 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 CGB2Q6NT52 195 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 PPP4R4Q6NUP7 873 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 C4orf22Q6V702 233 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 DSTYKQ6XUX3 929 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 ZNF589Q86UQ0 364 aaPredicted RBP8.99□□□□□ -0.97
SHPRH-208ENST00000520752 NOSTRINQ8IVI9 506 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 HACE1Q8IYU2 909 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 SYCE1Q8N0S2 351 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 FAM172AQ8WUF8 416 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 RAPGEF4Q8WZA2 1011 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 PEX13Q92968 403 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 EGLN2Q96KS0 407 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 CEP19Q96LK0 163 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 ZNF641Q96N77 438 aaPredicted RBP8.99□□□□□ -0.97
SHPRH-208ENST00000520752 FERD3LQ96RJ6 166 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 FERMT1Q9BQL6 677 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 ERP44Q9BS26 406 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 SENP6Q9GZR1 1112 aaPredicted RBP8.99□□□□□ -0.97
SHPRH-208ENST00000520752 MTFR1LQ9H019 292 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 EBF3Q9H4W6 596 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 C7orf69Q9H7B7 122 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 C1GALT1Q9NS00 363 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 SMARCAL1Q9NZC9 954 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 TFR2Q9UP52 801 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 ZNF652Q9Y2D9 606 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 CEPT1Q9Y6K0 416 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 C1orf167Q5SNV9 1468 aa8.99□□□□□ -0.97
SHPRH-208ENST00000520752 C15orf38-AP3S2A0A0A6YYH1 394 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 TLDC2A0PJX2 215 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms