RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 RFC1P35251 1148 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-208ENST00000520561 IRS1P35568 1242 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 FLT3P36888 993 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 SSR1P43307 286 aaKnown RBP9.38□□□□□ -0.91
CSMD1-208ENST00000520561 ZNF143P52747 638 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-208ENST00000520561 YWHAZP63104 245 aaKnown RBP9.38□□□□□ -0.91
CSMD1-208ENST00000520561 TWF1Q12792 350 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 ACAP1Q15027 740 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 PM20D1Q6GTS8 502 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 ARCQ7LC44 396 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 SLFN11Q7Z7L1 901 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 ITIH5Q86UX2 942 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 DEFB106AQ8N104 65 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 ELMOD1Q8N336 334 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 NIPA2Q8N8Q9 360 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 KREMEN2Q8NCW0 462 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 STKLD1Q8NE28 680 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 PDZD8Q8NEN9 1154 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 SCAMP5Q8TAC9 235 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 SLC7A14Q8TBB6 771 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 GPR152Q8TDT2 470 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 GIPC2Q8TF65 315 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 RXFP2Q8WXD0 754 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 PPP2R3CQ969Q6 453 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 SLITRK1Q96PX8 696 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 WDR24Q96S15 920 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 NCAPGQ9BPX3 1015 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 CNPY3Q9BT09 278 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 TRIM7Q9C029 511 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 GOLPH3Q9H4A6 298 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 RRN3Q9NYV6 651 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.38□□□□□ -0.91
CSMD1-208ENST00000520561 DPP7Q9UHL4 492 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 MAGED2Q9UNF1 606 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-208ENST00000520561 SCML2Q9UQR0 700 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 USTQ9Y2C2 406 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 PLXNA3P51805 1871 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 MKI67P46013 3256 aaKnown RBP9.37□□□□□ -0.91
CSMD1-208ENST00000520561 YJEFN3A6XGL0 299 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 MIF4GDA9UHW6 222 aaKnown RBP9.37□□□□□ -0.91
CSMD1-208ENST00000520561 E7ENQ6 273 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 CLASP2O75122 1294 aaKnown RBP9.37□□□□□ -0.91
CSMD1-208ENST00000520561 C8AP07357 584 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 NCAM1P13591 858 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 COMTP21964 271 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 NOS2P35228 1153 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 MATKP42679 507 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 PTPN9P43378 593 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 SULT1E1P49888 294 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 DNA2P51530 1060 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 CLCN4P51793 760 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 YWHAGP61981 247 aaKnown RBP eCLIP9.37□□□□□ -0.91
CSMD1-208ENST00000520561 OGDHQ02218 1023 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 ZNF252P-AS1Q0IIN9 211 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 RPS6KA1Q15418 735 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 TAF5Q15542 800 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 HADHQ16836 314 aaKnown RBP9.37□□□□□ -0.91
CSMD1-208ENST00000520561 CDO1Q16878 200 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 PPM1LQ5SGD2 360 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 BTBD8Q5XKL5 378 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 HFE2Q6ZVN8 426 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 BHLHA9Q7RTU4 235 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 NT5DC3Q86UY8 548 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 UBL4BQ8N7F7 174 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 OVCA2Q8WZ82 227 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 NDRG1Q92597 394 aaKnown RBP9.37□□□□□ -0.91
CSMD1-208ENST00000520561 CFAP57Q96MR6 1250 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 SLC2A13Q96QE2 648 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 TTLL2Q9BWV7 592 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 PRO3102Q9H379 93 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 PLEKHA4Q9H4M7 779 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 MAN1C1Q9NR34 630 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 TLR8Q9NR97 1041 aaKnown RBP9.37□□□□□ -0.91
CSMD1-208ENST00000520561 GMIPQ9P107 970 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 UXTQ9UBK9 157 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-208ENST00000520561 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.37□□□□□ -0.91
CSMD1-208ENST00000520561 HYOU1Q9Y4L1 999 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 ASB3Q9Y575 518 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 ALG6Q9Y672 507 aa9.37□□□□□ -0.91
CSMD1-208ENST00000520561 FAM92AA1XBS5 289 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 CCDC66A2RUB6 948 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 ENC1O14682 589 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 PSTPIP1O43586 416 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 NCK2O43639 380 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 ATP1A1P05023 1023 aaKnown RBP9.36□□□□□ -0.91
CSMD1-208ENST00000520561 SPATA31D3P0C874 917 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 RALAP11233 206 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 TCP1P17987 556 aaKnown RBP9.36□□□□□ -0.91
CSMD1-208ENST00000520561 CTNNA2P26232 953 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 RDXP35241 583 aaKnown RBP9.36□□□□□ -0.91
CSMD1-208ENST00000520561 GJC1P36383 396 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 PSEN1P49768 467 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 USP46P62068 366 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 ATP11AP98196 1134 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 TAF10Q12962 218 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 MTMR3Q13615 1198 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 CAMK1Q14012 370 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 SLC25A52Q3SY17 297 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 CCDC14Q49A88 953 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 DCAF6Q58WW2 860 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms