RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 BEST2Q8NFU1 509 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 PCDHB18PQ96TA0 734 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 GAD1Q99259 594 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 AGPAT1Q99943 283 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 IFIH1Q9BYX4 1025 aaKnown RBP8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 IMPG2Q9BZV3 1241 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 SDCBP2Q9H190 292 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 DEF6Q9H4E7 631 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 PIDD1Q9HB75 910 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 TRIM10Q9UDY6 481 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 UBQLN1Q9UMX0 589 aaKnown RBP8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 GIT1Q9Y2X7 761 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 PCDHB4Q9Y5E5 795 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 LTBP2Q14767 1821 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 GOLGA6L9A6NEM1 432 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 DCDC2CA8MYV0 355 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 FANCGO15287 622 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 INPPL1O15357 1258 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 TLR3O15455 904 aaKnown RBP8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 TUBB4AP04350 444 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 TNFAIP3P21580 790 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 IGFBP6P24592 240 aaPredicted RBP8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 LRPAP1P30533 357 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 MLH1P40692 756 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 RAP1GAPP47736 663 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 CDH8P55286 799 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 FMO1Q01740 532 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 CDR2Q01850 454 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 PTPN14Q15678 1187 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 WDR72Q3MJ13 1102 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 ZNF667Q5HYK9 610 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 C10orf76Q5T2E6 689 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 TMEM270Q6UE05 265 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 SLC24A5Q71RS6 500 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 KIAA1328Q86T90 577 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 PDZD3Q86UT5 571 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 HACE1Q8IYU2 909 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 RPUSD2Q8IZ73 545 aaKnown RBP8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 LRRC52Q8N7C0 313 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 RBBP8NLQ8NC74 664 aaPredicted RBP8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 ANKRD7Q92527 254 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 VWCEQ96DN2 955 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 PAWRQ96IZ0 340 aaKnown RBP8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 C16orf45Q96MC5 204 aaPredicted RBP8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 FANCD2OSQ96PS1 177 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 ZSWIM1Q9BR11 485 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 WNT8AQ9H1J5 351 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 C11orf49Q9H6J7 331 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 SMYD3Q9H7B4 428 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 CYP3A43Q9HB55 503 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 LZTFL1Q9NQ48 299 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 CISHQ9NSE2 258 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 ADGRE2Q9UHX3 823 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 TBX21Q9UL17 535 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 PCDHGC5Q9Y5F6 944 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 DUSP10Q9Y6W6 482 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 TSC2P49815 1807 aa8.36□□□□□ -1.07
CTHRC1-203ENST00000520337 ATP8B3O60423 1300 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 VWA8A3KMH1 1905 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 PTPRSQ13332 1948 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 KIF2AO00139 706 aaPredicted RBP8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 ENPP3O14638 875 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 XPOTO43592 962 aaKnown RBP8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 IPO7O95373 1038 aaKnown RBP8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 EOMESO95936 686 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 CXCL10P02778 98 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 MMEP08473 750 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 TNNT1P13805 278 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 CYP2C18P33260 490 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 RAD23BP54727 409 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 BPIFB4P59827 614 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 ETF1P62495 437 aaKnown RBP8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 FAM193AP78312 1265 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 LRRC26Q2I0M4 334 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 CYP27C1Q4G0S4 372 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 CCDC122Q5T0U0 273 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 TAF3Q5VWG9 929 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 ALKBH5Q6P6C2 394 aaKnown RBP8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 SCARA5Q6ZMJ2 495 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 FAM43BQ6ZT52 329 aaPredicted RBP8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 LIMS2Q7Z4I7 341 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 VPS36Q86VN1 386 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 DNAAF5Q86Y56 855 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 SULF2Q8IWU5 870 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 DBF4BQ8NFT6 615 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 PGBD4Q96DM1 585 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 WDR89Q96FK6 387 aaPredicted RBP8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 WDR24Q96S15 920 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 FTHL17Q9BXU8 183 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 EMILIN2Q9BXX0 1053 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 PACSIN1Q9BY11 444 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 HIPK3Q9H422 1215 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 FAM124BQ9H5Z6 455 aaPredicted RBP8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 RSAD1Q9HA92 442 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 SLC38A7Q9NVC3 462 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 GDAP2Q9NXN4 497 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 TAS2R14Q9NYV8 317 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 CACNG4Q9UBN1 327 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms