RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 HAPLN1P10915 354 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-207ENST00000520168 HMGA1P17096 107 aaKnown RBP5.26□□□□□ -1.57
SDCBP-207ENST00000520168 OPRD1P41143 372 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 GRIA2P42262 883 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 MATKP42679 507 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 IL12RB1P42701 662 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 CSRP3P50461 194 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 LILRA4P59901 499 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 PPP2R3AQ06190 1150 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 RESTQ13127 1097 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 KCNB1Q14721 858 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 NOLC1Q14978 699 aaKnown RBP eCLIP5.26□□□□□ -1.57
SDCBP-207ENST00000520168 CALCRLQ16602 461 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 NFE2Q16621 373 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-207ENST00000520168 ADCK5Q3MIX3 580 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 TAF1BQ53T94 588 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-207ENST00000520168 HAUS3Q68CZ6 603 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 NAIF1Q69YI7 327 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-207ENST00000520168 BLOC1S2Q6QNY1 142 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 PIK3AP1Q6ZUJ8 805 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 TMEM150AQ86TG1 271 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 THEM5Q8N1Q8 247 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 GPATCH11Q8N954 259 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 TRIML1Q8N9V2 468 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 RHBDD1Q8TEB9 315 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 LEO1Q8WVC0 666 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-207ENST00000520168 CALR3Q96L12 384 aaKnown RBP5.26□□□□□ -1.57
SDCBP-207ENST00000520168 MYRFLQ96LU7 910 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 CEP295NLQ96MC4 621 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 HSPA12BQ96MM6 686 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 NRSN2Q9GZP1 204 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 ZCWPW1Q9H0M4 648 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 BRMS1Q9HCU9 246 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 FSCN3Q9NQT6 498 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 TM7SF3Q9NS93 570 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 EHD2Q9NZN4 543 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 CALCOCO1Q9P1Z2 691 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 ARHGAP28Q9P2N2 729 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 ARHGAP26Q9UNA1 814 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 PCDHB5Q9Y5E4 795 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 PCDHGA1Q9Y5H4 931 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 TIMM13Q9Y5L4 95 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-207ENST00000520168 WNT6Q9Y6F9 365 aa5.26□□□□□ -1.57
SDCBP-207ENST00000520168 IGHV1OR15-9A0A0B4J2B8 117 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 SHISA8B8ZZ34 492 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 NEMFO60524 1076 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 CILPO75339 1184 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 SOAT2O75908 522 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 KAT7O95251 611 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 NFICP08651 508 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 C1SP09871 688 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 HNRNPLP14866 589 aaKnown RBP eCLIP5.25□□□□□ -1.57
SDCBP-207ENST00000520168 SCP2P22307 547 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 RPA1P27694 616 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 ITPKBP27987 946 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 PSMA5P28066 241 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 NMT1P30419 496 aaKnown RBP5.25□□□□□ -1.57
SDCBP-207ENST00000520168 GRK6P43250 576 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 KIR2DL1P43626 348 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-207ENST00000520168 PPP3CCP48454 512 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 RPL10AP62906 217 aaKnown RBP5.25□□□□□ -1.57
SDCBP-207ENST00000520168 TSPY1Q01534 308 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 SRSF1Q07955 248 aaKnown RBP eCLIP5.25□□□□□ -1.57
SDCBP-207ENST00000520168 STRN3Q13033 797 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 LBRQ14739 615 aaKnown RBP5.25□□□□□ -1.57
SDCBP-207ENST00000520168 SLC10A6Q3KNW5 377 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 SDE2Q6IQ49 451 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 DDX42Q86XP3 938 aaKnown RBP eCLIP5.25□□□□□ -1.57
SDCBP-207ENST00000520168 CATSPER3Q86XQ3 398 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 SLC41A1Q8IVJ1 513 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 CD302Q8IX05 232 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 TTC9BQ8N6N2 239 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 FRMD1Q8N878 549 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 ZNF513Q8N8E2 541 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-207ENST00000520168 FAM181AQ8N9Y4 354 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 CADM4Q8NFZ8 388 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 OR2I1PQ8NGU4 316 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 RIN3Q8TB24 985 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 GIPC2Q8TF65 315 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 DNASE2BQ8WZ79 361 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 OTUB2Q96DC9 234 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 SENP8Q96LD8 212 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 KIFC3Q9BVG8 833 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 TIPINQ9BVW5 301 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 ALG2Q9H553 416 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 GAREM1Q9H706 876 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 PRDM16Q9HAZ2 1276 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 ABCB6Q9NP58 842 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 KMT5AQ9NQR1 393 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 ARHGEF4Q9NR80 690 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 ABI2Q9NYB9 513 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-207ENST00000520168 TUBGCP4Q9UGJ1 667 aa5.25□□□□□ -1.57
SDCBP-207ENST00000520168 USP9XQ93008 2570 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-207ENST00000520168 NBPF19A0A087WUL8 3843 aa5.24□□□□□ -1.57
SDCBP-207ENST00000520168 KNTC1P50748 2209 aa5.24□□□□□ -1.57
SDCBP-207ENST00000520168 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-207ENST00000520168 A0A1B0GTH6 734 aa5.24□□□□□ -1.57
SDCBP-207ENST00000520168 TTC26A0AVF1 554 aa5.24□□□□□ -1.57
SDCBP-207ENST00000520168 CCDC169A6NNP5 214 aa5.24□□□□□ -1.57
SDCBP-207ENST00000520168 MEI4A8MW99 385 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms