RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 CHKAP35790 457 aa19.29■□□□□ 0.68
FAM49B-214ENST00000519540 MATKP42679 507 aa19.29■□□□□ 0.68
FAM49B-214ENST00000519540 BRCC3P46736 316 aa19.29■□□□□ 0.68
FAM49B-214ENST00000519540 KRT81Q14533 505 aa19.29■□□□□ 0.68
FAM49B-214ENST00000519540 P3H1Q32P28 736 aa19.29■□□□□ 0.68
FAM49B-214ENST00000519540 FAM35AQ86V20 835 aa19.29■□□□□ 0.68
FAM49B-214ENST00000519540 CCDC25Q86WR0 208 aa19.29■□□□□ 0.68
FAM49B-214ENST00000519540 SPATA18Q8TC71 538 aa19.29■□□□□ 0.68
FAM49B-214ENST00000519540 NDRG1Q92597 394 aaKnown RBP19.29■□□□□ 0.68
FAM49B-214ENST00000519540 ATP6V1G3Q96LB4 118 aa19.29■□□□□ 0.68
FAM49B-214ENST00000519540 RNF157Q96PX1 679 aa19.29■□□□□ 0.68
FAM49B-214ENST00000519540 TSPYL1Q9H0U9 437 aa19.29■□□□□ 0.68
FAM49B-214ENST00000519540 LRRC4Q9HBW1 653 aa19.29■□□□□ 0.68
FAM49B-214ENST00000519540 GPATCH2LQ9NWQ4 482 aa19.29■□□□□ 0.68
FAM49B-214ENST00000519540 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.29■□□□□ 0.68
FAM49B-214ENST00000519540 M0QZQ0 153 aa19.28■□□□□ 0.68
FAM49B-214ENST00000519540 SGK1O00141 431 aa19.28■□□□□ 0.68
FAM49B-214ENST00000519540 PECAM1P16284 738 aaPredicted RBP19.28■□□□□ 0.68
FAM49B-214ENST00000519540 NDUFV1P49821 464 aa19.28■□□□□ 0.68
FAM49B-214ENST00000519540 FAM189BP81408 668 aa19.28■□□□□ 0.68
FAM49B-214ENST00000519540 TFDP2Q14188 446 aa19.28■□□□□ 0.68
FAM49B-214ENST00000519540 SLC29A2Q14542 456 aa19.28■□□□□ 0.68
FAM49B-214ENST00000519540 DENND2CQ68D51 928 aa19.28■□□□□ 0.68
FAM49B-214ENST00000519540 HIBCHQ6NVY1 386 aaPredicted RBP19.28■□□□□ 0.68
FAM49B-214ENST00000519540 DCLRE1AQ6PJP8 1040 aa19.28■□□□□ 0.68
FAM49B-214ENST00000519540 METTL23Q86XA0 190 aa19.28■□□□□ 0.68
FAM49B-214ENST00000519540 LINC01599Q8WXQ3 324 aa19.28■□□□□ 0.68
FAM49B-214ENST00000519540 SMOQ99835 787 aa19.28■□□□□ 0.68
FAM49B-214ENST00000519540 ADAM7Q9H2U9 754 aa19.28■□□□□ 0.68
FAM49B-214ENST00000519540 PCDH18Q9HCL0 1135 aa19.28■□□□□ 0.68
FAM49B-214ENST00000519540 KBTBD13C9JR72 458 aa19.27■□□□□ 0.68
FAM49B-214ENST00000519540 AP1G2O75843 785 aa19.27■□□□□ 0.68
FAM49B-214ENST00000519540 YWHAZP63104 245 aaKnown RBP19.27■□□□□ 0.68
FAM49B-214ENST00000519540 HTRA3P83110 453 aa19.27■□□□□ 0.68
FAM49B-214ENST00000519540 CA9Q16790 459 aa19.27■□□□□ 0.68
FAM49B-214ENST00000519540 ERMARDQ5T6L9 678 aa19.27■□□□□ 0.68
FAM49B-214ENST00000519540 VSIG1Q86XK7 387 aa19.27■□□□□ 0.68
FAM49B-214ENST00000519540 DEFB106AQ8N104 65 aa19.27■□□□□ 0.68
FAM49B-214ENST00000519540 SH2D3CQ8N5H7 860 aa19.27■□□□□ 0.68
FAM49B-214ENST00000519540 HASPINQ8TF76 798 aa19.27■□□□□ 0.68
FAM49B-214ENST00000519540 RSPH1Q8WYR4 309 aa19.27■□□□□ 0.68
FAM49B-214ENST00000519540 ACBD6Q9BR61 282 aa19.27■□□□□ 0.68
FAM49B-214ENST00000519540 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.27■□□□□ 0.68
FAM49B-214ENST00000519540 HMGB1P1B2RPK0 211 aaPredicted RBP19.27■□□□□ 0.67
FAM49B-214ENST00000519540 DNALI1O14645 258 aaPredicted RBP19.27■□□□□ 0.67
FAM49B-214ENST00000519540 RIPK2O43353 540 aa19.27■□□□□ 0.67
FAM49B-214ENST00000519540 SHBGP04278 402 aa19.27■□□□□ 0.67
FAM49B-214ENST00000519540 CDK7P50613 346 aa19.27■□□□□ 0.67
FAM49B-214ENST00000519540 TKTL1P51854 596 aa19.27■□□□□ 0.67
FAM49B-214ENST00000519540 ATXN1P54253 815 aaKnown RBP19.27■□□□□ 0.67
FAM49B-214ENST00000519540 IFFO1Q0D2I5 559 aa19.27■□□□□ 0.67
FAM49B-214ENST00000519540 UBAP2Q5T6F2 1119 aaKnown RBP19.27■□□□□ 0.67
FAM49B-214ENST00000519540 GLB1LQ6UWU2 654 aa19.27■□□□□ 0.67
FAM49B-214ENST00000519540 TRMT10CQ7L0Y3 403 aaKnown RBP19.27■□□□□ 0.67
FAM49B-214ENST00000519540 STRADAQ7RTN6 431 aa19.27■□□□□ 0.67
FAM49B-214ENST00000519540 SIX6OS1Q8N1H7 587 aa19.27■□□□□ 0.67
FAM49B-214ENST00000519540 ZMIZ2Q8NF64 920 aa19.27■□□□□ 0.67
FAM49B-214ENST00000519540 FAM149B1Q96BN6 582 aa19.27■□□□□ 0.67
FAM49B-214ENST00000519540 KCNK16Q96T55 309 aa19.27■□□□□ 0.67
FAM49B-214ENST00000519540 C10orf88Q9H8K7 445 aa19.27■□□□□ 0.67
FAM49B-214ENST00000519540 PCDH9Q9HC56 1237 aa19.27■□□□□ 0.67
FAM49B-214ENST00000519540 DSEQ9UL01 958 aa19.27■□□□□ 0.67
FAM49B-214ENST00000519540 DAB1O75553 588 aa19.26■□□□□ 0.67
FAM49B-214ENST00000519540 EIF3EP60228 445 aaKnown RBP19.26■□□□□ 0.67
FAM49B-214ENST00000519540 GPS1Q13098 491 aa19.26■□□□□ 0.67
FAM49B-214ENST00000519540 SLC25A52Q3SY17 297 aa19.26■□□□□ 0.67
FAM49B-214ENST00000519540 ANKRD20A8PQ5CZ79 823 aa19.26■□□□□ 0.67
FAM49B-214ENST00000519540 FAM171BQ6P995 826 aa19.26■□□□□ 0.67
FAM49B-214ENST00000519540 SH3TC2Q8TF17 1288 aa19.26■□□□□ 0.67
FAM49B-214ENST00000519540 LRRC4CQ9HCJ2 640 aa19.26■□□□□ 0.67
FAM49B-214ENST00000519540 TMEM30AQ9NV96 361 aa19.26■□□□□ 0.67
FAM49B-214ENST00000519540 SAGE1Q9NXZ1 904 aa19.26■□□□□ 0.67
FAM49B-214ENST00000519540 CALCOCO1Q9P1Z2 691 aa19.26■□□□□ 0.67
FAM49B-214ENST00000519540 TSC2P49815 1807 aa19.26■□□□□ 0.67
FAM49B-214ENST00000519540 IFNB1P01574 187 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 ITGB1P05556 798 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 LMAN1P49257 510 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 CACNA2D1P54289 1103 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 GLIPR1L2Q4G1C9 344 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 CLLU1OSQ5K130 101 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 LRRC8DQ7L1W4 858 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 P3H4Q92791 437 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 NT5C3BQ969T7 300 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 PKNOX2Q96KN3 472 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 SUSD3Q96L08 255 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 PWWP2AQ96N64 755 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 CDC42EP4Q9H3Q1 356 aaKnown RBP19.25■□□□□ 0.67
FAM49B-214ENST00000519540 CENPHQ9H3R5 247 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 TPX2Q9ULW0 747 aaKnown RBP19.25■□□□□ 0.67
FAM49B-214ENST00000519540 TRIM17Q9Y577 477 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 ZNF487B1APH4 448 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 FBXO21O94952 628 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 SELPP16109 830 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 L1CAMP32004 1257 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 NOS2P35228 1153 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 RABGGTBP53611 331 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 GDF10P55107 478 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 NOMO1Q15155 1222 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 DPYSL2Q16555 572 aa19.25■□□□□ 0.67
FAM49B-214ENST00000519540 KRT71Q3SY84 523 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 620.3 ms