RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 GMIPQ9P107 970 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 BCCIPQ9P287 314 aaKnown RBP eCLIP11.51□□□□□ -0.57
PVT1-208ENST00000519481 DEC1Q9P2X7 70 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
PVT1-208ENST00000519481 INVSQ9Y283 1065 aa11.51□□□□□ -0.57
PVT1-208ENST00000519481 DNAH14Q0VDD8 3507 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 BCLAF3A2AJT9 711 aaKnown RBP11.5□□□□□ -0.57
PVT1-208ENST00000519481 TBC1D3BA6NDS4 549 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 TNFRSF10BO14763 440 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 KHNYNO15037 678 aaKnown RBP11.5□□□□□ -0.57
PVT1-208ENST00000519481 MAPK13O15264 365 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 ZBTB24O43167 697 aaPredicted RBP11.5□□□□□ -0.57
PVT1-208ENST00000519481 MAP3K13O43283 966 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 TLR5O60602 858 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 ASS1P00966 412 aaKnown RBP11.5□□□□□ -0.57
PVT1-208ENST00000519481 HLA-DRAP01903 254 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 FAM200BP0CF97 657 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 IRF1P10914 325 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 CCDC130P13994 396 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 RPL13P26373 211 aaKnown RBP11.5□□□□□ -0.57
PVT1-208ENST00000519481 SLC6A11P48066 632 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 VAMP7P51809 220 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 MAP3K7CLP57077 242 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 DLG4P78352 724 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 KDSRQ06136 332 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 PKP1Q13835 747 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 GAB4Q2WGN9 574 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 ANO4Q32M45 955 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 PAQR9Q6ZVX9 377 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 INTS8Q75QN2 995 aaKnown RBP11.5□□□□□ -0.57
PVT1-208ENST00000519481 CYP2U1Q7Z449 544 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 RASSF3Q86WH2 238 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 CRYBG2Q8N1P7 616 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 PGBD3Q8N328 593 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 ALLCQ8N6M5 410 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 TXNDC5Q8NBS9 432 aaKnown RBP11.5□□□□□ -0.57
PVT1-208ENST00000519481 SLC2A14Q8TDB8 520 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 WHAMMQ8TF30 809 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 CHAMP1Q96JM3 812 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 DUSP9Q99956 384 aaKnown RBP11.5□□□□□ -0.57
PVT1-208ENST00000519481 EDEM2Q9BV94 578 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 SDCBP2Q9H190 292 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 SMOC1Q9H4F8 434 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 CCSER2Q9H7U1 834 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 CYP3A43Q9HB55 503 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 FAM49BQ9NUQ9 324 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 LSM7Q9UK45 103 aaKnown RBP11.5□□□□□ -0.57
PVT1-208ENST00000519481 ATP6V1DQ9Y5K8 247 aa11.5□□□□□ -0.57
PVT1-208ENST00000519481 A0A0A0MRY4 1105 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 FAM92AA1XBS5 289 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 HOXC11O43248 304 aaPredicted RBP11.49□□□□□ -0.57
PVT1-208ENST00000519481 ZDHHC11BP0C7U3 371 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 NR2F2P24468 414 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 ADORA2BP29275 332 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 ATP5C1P36542 298 aaKnown RBP11.49□□□□□ -0.57
PVT1-208ENST00000519481 DHPSP49366 369 aaPredicted RBP11.49□□□□□ -0.57
PVT1-208ENST00000519481 DAB2IPQ5VWQ8 1189 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 PMS2CLQ68D20 193 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 LPCAT2Q7L5N7 544 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 TADA2BQ86TJ2 420 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 BBS7Q8IWZ6 715 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 NAT16Q8N8M0 369 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 IL17RCQ8NAC3 791 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 MDGA1Q8NFP4 955 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 KCNV2Q8TDN2 545 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 ELMO3Q96BJ8 720 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 ZFRQ96KR1 1074 aaKnown RBP11.49□□□□□ -0.57
PVT1-208ENST00000519481 XPO6Q96QU8 1125 aaKnown RBP11.49□□□□□ -0.57
PVT1-208ENST00000519481 SMOQ99835 787 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 NT5C1AQ9BXI3 368 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 CSNK1G1Q9HCP0 422 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.49□□□□□ -0.571e-6■■■■■ 85.4
PVT1-208ENST00000519481 SPHK2Q9NRA0 654 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 TRAF3IP3Q9Y228 551 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 CACNA1BQ00975 2339 aa11.49□□□□□ -0.57
PVT1-208ENST00000519481 SGK1O00141 431 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 RHOBTB3O94955 611 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 PSMC2P35998 433 aaKnown RBP11.48□□□□□ -0.57
PVT1-208ENST00000519481 DPP6P42658 865 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 ENPEPQ07075 957 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 ORC1Q13415 861 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 NFIL3Q16649 462 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 GRAMD4Q6IC98 578 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 TCEAL6Q6IPX3 200 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 SPOPLQ6IQ16 392 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 SDE2Q6IQ49 451 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 TMEM92Q6UXU6 159 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 C12orf40Q86WS4 652 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 FAM186BQ8IYM0 893 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 TTC39CQ8N584 583 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 ZNF513Q8N8E2 541 aaPredicted RBP11.48□□□□□ -0.57
PVT1-208ENST00000519481 C12orf29Q8N999 325 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 ZMIZ2Q8NF64 920 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 TCEAL3Q969E4 200 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 JAKMIP2Q96AA8 810 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 CYFIP2Q96F07 1278 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 HNRNPABQ99729 332 aaKnown RBP11.48□□□□□ -0.57
PVT1-208ENST00000519481 LSM14BQ9BX40 385 aaKnown RBP11.48□□□□□ -0.57
PVT1-208ENST00000519481 NIF3L1Q9GZT8 377 aa11.48□□□□□ -0.57
PVT1-208ENST00000519481 SCAND2PQ9GZW5 306 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms