RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 ZNF571Q7Z3V5 609 aaPredicted RBP8.01□□□□□ -1.13
SDCBP-206ENST00000519115 GPIHBP1Q8IV16 184 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 FUKQ8N0W3 1084 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 C12orf29Q8N999 325 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 LEMD2Q8NC56 503 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 TRIM58Q8NG06 486 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 KIF18AQ8NI77 898 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 WHAMMQ8TF30 809 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 FGF14Q92915 247 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 KAT5Q92993 513 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 TRIM11Q96F44 468 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 PPP1R13BQ96KQ4 1090 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 GCNAQ96QF7 691 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 AGPAT1Q99943 283 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 NT5C1AQ9BXI3 368 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 ATXN3LQ9H3M9 355 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 IL21Q9HBE4 155 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 C11orf16Q9NQ32 467 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 PCDHGC3Q9UN70 934 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 ZFP37Q9Y6Q3 630 aaPredicted RBP8.01□□□□□ -1.13
SDCBP-206ENST00000519115 NUMBLQ9Y6R0 609 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 MIA3Q5JRA6 1907 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 NCANO14594 1321 aa8.01□□□□□ -1.13
SDCBP-206ENST00000519115 KMT2EQ8IZD2 1858 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 ZNF318Q5VUA4 2279 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 A0A087X0T9 212 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 ANHXE9PGG2 379 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 TRIM66O15016 1216 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 MED7O43513 233 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 KIF5CO60282 957 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 TADA3O75528 432 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 AP1G2O75843 785 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 H2AFZP0C0S5 128 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 TMEM253P0C7T8 217 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 FAM228BP0C875 321 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 CSH1P0DML2 217 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 CSH2P0DML3 217 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 CDC25CP30307 473 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 CDH5P33151 784 aaPredicted RBP8□□□□□ -1.13
SDCBP-206ENST00000519115 PDE6CP51160 858 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 SNX16P57768 344 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 USP46P62068 366 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 TDGQ13569 410 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 TDRD12Q587J7 1177 aaKnown RBP8□□□□□ -1.13
SDCBP-206ENST00000519115 FAM78AQ5JUQ0 283 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 GPR158Q5T848 1215 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 VSTM1Q6UX27 236 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 TOGARAM2Q6ZUX3 1019 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 PAQR9Q6ZVX9 377 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 H2AFVQ71UI9 128 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 MTSS1LQ765P7 747 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 TMEM150AQ86TG1 271 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 ARHGEF19Q8IW93 802 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 CRYBG2Q8N1P7 616 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 ZSCAN18Q8TBC5 510 aaPredicted RBP8□□□□□ -1.13
SDCBP-206ENST00000519115 SLC2A14Q8TDB8 520 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 EPS8L1Q8TE68 723 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 DDX1Q92499 740 aaKnown RBP8□□□□□ -1.13
SDCBP-206ENST00000519115 EDAQ92838 391 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 SMARCD1Q96GM5 515 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 ASB16Q96NS5 453 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 KCNK16Q96T55 309 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 MIS12Q9H081 205 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 CYLDQ9NQC7 956 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 CISHQ9NSE2 258 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 TMEM51Q9NW97 253 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 GDE1Q9NZC3 331 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 IGSF9Q9P2J2 1179 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 NOCTQ9UK39 431 aaKnown RBP8□□□□□ -1.13
SDCBP-206ENST00000519115 F5P12259 2224 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 COL4A2P08572 1712 aa8□□□□□ -1.13
SDCBP-206ENST00000519115 MYOFQ9NZM1 2061 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 TMEM221A6NGB7 291 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 M0R296 226 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 CYP26A1O43174 497 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 BEST1O76090 585 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 MTA2O94776 668 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 PRAMEF12O95522 483 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 FGF19O95750 216 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 PDGFBP01127 241 aaPredicted RBP7.99□□□□□ -1.13
SDCBP-206ENST00000519115 CALCAP01258 141 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 F11P03951 625 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 CYP1A1P04798 512 aaPredicted RBP7.99□□□□□ -1.13
SDCBP-206ENST00000519115 CFHP08603 1231 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 UNGP13051 313 aaPredicted RBP7.99□□□□□ -1.13
SDCBP-206ENST00000519115 FCARP24071 287 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 VIPR2P41587 438 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 ARHGAP25P42331 645 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 RAD23BP54727 409 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 MAP3K7CLP57077 242 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 APBA1Q02410 837 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 GOLGA8FQ08AF8 430 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 GOLGA8DPQ0D2H9 430 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 GRM2Q14416 872 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 CNGA2Q16280 664 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 ARHGAP44Q17R89 818 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 ARHGAP15Q53QZ3 475 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 CCDC122Q5T0U0 273 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 TXNDC8Q6A555 127 aa7.99□□□□□ -1.13
SDCBP-206ENST00000519115 TANGO2Q6ICL3 276 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms