RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 SCD5Q86SK9 330 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 SIX6OS1Q8N1H7 587 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 ARHGAP18Q8N392 663 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 NEK11Q8NG66 645 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 RIN3Q8TB24 985 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 LRFN3Q9BTN0 628 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 ULBP1Q9BZM6 244 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 OSER1Q9NX31 292 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 CPQQ9Y646 472 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 GOLGA6L19H0YKK7 550 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 MBL2P11226 248 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-217ENST00000518538 RGS7P49802 495 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 ZXDBP98169 803 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 MTF1Q14872 753 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 MLF2Q15773 248 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-217ENST00000518538 SLC44A4Q53GD3 710 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 CC2D1AQ6P1N0 951 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-217ENST00000518538 DENND1BQ6P3S1 775 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 LRSAM1Q6UWE0 723 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 SLC47A2Q86VL8 602 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 SCML4Q8N228 414 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 ZNF276Q8N554 614 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 ZFYVE19Q96K21 471 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 CNGB3Q9NQW8 809 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.12■■□□□ 1.29
VEGFA-217ENST00000518538 CLIC5Q9NZA1 410 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 NAGPAQ9UK23 515 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 PCDHGC3Q9UN70 934 aa23.12■■□□□ 1.29
VEGFA-217ENST00000518538 KIF26AQ9ULI4 1882 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-217ENST00000518538 A0A1B0GTH6 734 aa23.11■■□□□ 1.29
VEGFA-217ENST00000518538 LEFTY2O00292 366 aa23.11■■□□□ 1.29
VEGFA-217ENST00000518538 SERPINC1P01008 464 aa23.11■■□□□ 1.29
VEGFA-217ENST00000518538 PDGFBP01127 241 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-217ENST00000518538 RARGP13631 454 aa23.11■■□□□ 1.29
VEGFA-217ENST00000518538 PRKCQQ04759 706 aa23.11■■□□□ 1.29
VEGFA-217ENST00000518538 IER5LQ5T953 404 aa23.11■■□□□ 1.29
VEGFA-217ENST00000518538 KLHDC10Q6PID8 442 aa23.11■■□□□ 1.29
VEGFA-217ENST00000518538 DDX42Q86XP3 938 aaKnown RBP eCLIP23.11■■□□□ 1.298e-11■■■■□ 22.3
VEGFA-217ENST00000518538 KIAA1958Q8N8K9 716 aa23.11■■□□□ 1.29
VEGFA-217ENST00000518538 STK32AQ8WU08 396 aa23.11■■□□□ 1.29
VEGFA-217ENST00000518538 SHDQ96IW2 340 aa23.11■■□□□ 1.29
VEGFA-217ENST00000518538 NACA2Q9H009 215 aa23.11■■□□□ 1.29
VEGFA-217ENST00000518538 MFSD1Q9H3U5 465 aa23.11■■□□□ 1.29
VEGFA-217ENST00000518538 TSPY26PQ9H489 355 aa23.11■■□□□ 1.29
VEGFA-217ENST00000518538 SMPD4Q9NXE4 827 aa23.11■■□□□ 1.29
VEGFA-217ENST00000518538 HELZP42694 1942 aaKnown RBP23.11■■□□□ 1.29
VEGFA-217ENST00000518538 TEX33O43247 280 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 GABBR2O75899 941 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 RALAP11233 206 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 LCP1P13796 627 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 ATP5C1P36542 298 aaKnown RBP23.1■■□□□ 1.29
VEGFA-217ENST00000518538 RPL34P49207 117 aaKnown RBP23.1■■□□□ 1.29
VEGFA-217ENST00000518538 JAM2P57087 298 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 YWHAGP61981 247 aaKnown RBP eCLIP23.1■■□□□ 1.29
VEGFA-217ENST00000518538 BHLHA9Q7RTU4 235 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 TADA2BQ86TJ2 420 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 FBXL6Q8N531 539 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 TTC16Q8NEE8 873 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 CSGALNACT1Q8TDX6 532 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 ZFRQ96KR1 1074 aaKnown RBP23.1■■□□□ 1.29
VEGFA-217ENST00000518538 NAP1L5Q96NT1 182 aaPredicted RBP23.1■■□□□ 1.29
VEGFA-217ENST00000518538 CDK5RAP1Q96SZ6 601 aaKnown RBP23.1■■□□□ 1.29
VEGFA-217ENST00000518538 FAM83CQ9BQN1 747 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 NLRC4Q9NPP4 1024 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 HEBP1Q9NRV9 189 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 GKN1Q9NS71 199 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 COL4A2P08572 1712 aa23.1■■□□□ 1.29
VEGFA-217ENST00000518538 CYP11B1P15538 503 aa23.09■■□□□ 1.29
VEGFA-217ENST00000518538 KRT9P35527 623 aa23.09■■□□□ 1.29
VEGFA-217ENST00000518538 ACADSBP45954 432 aa23.09■■□□□ 1.29
VEGFA-217ENST00000518538 STARD6P59095 220 aa23.09■■□□□ 1.29
VEGFA-217ENST00000518538 DAOAP59103 153 aa23.09■■□□□ 1.29
VEGFA-217ENST00000518538 OSCP1Q8WVF1 389 aa23.09■■□□□ 1.29
VEGFA-217ENST00000518538 NDRG1Q92597 394 aaKnown RBP23.09■■□□□ 1.29
VEGFA-217ENST00000518538 SPAG5Q96R06 1193 aa23.09■■□□□ 1.29
VEGFA-217ENST00000518538 LHX5Q9H2C1 402 aa23.09■■□□□ 1.29
VEGFA-217ENST00000518538 FBXO21O94952 628 aa23.08■■□□□ 1.29
VEGFA-217ENST00000518538 TBX18O95935 607 aa23.08■■□□□ 1.29
VEGFA-217ENST00000518538 SOX5P35711 763 aa23.08■■□□□ 1.29
VEGFA-217ENST00000518538 MLLT6P55198 1093 aaPredicted RBP23.08■■□□□ 1.29
VEGFA-217ENST00000518538 FANCCQ00597 558 aa23.08■■□□□ 1.29
VEGFA-217ENST00000518538 PDGFRLQ15198 375 aa23.08■■□□□ 1.29
VEGFA-217ENST00000518538 C10orf120Q5SQS8 335 aa23.08■■□□□ 1.29
VEGFA-217ENST00000518538 TPRG1Q6ZUI0 275 aa23.08■■□□□ 1.29
VEGFA-217ENST00000518538 SUGP1Q8IWZ8 645 aaKnown RBP23.08■■□□□ 1.29
VEGFA-217ENST00000518538 IRGQQ8WZA9 623 aa23.08■■□□□ 1.29
VEGFA-217ENST00000518538 DDX23Q9BUQ8 820 aaKnown RBP23.08■■□□□ 1.29
VEGFA-217ENST00000518538 SLC4A5Q9BY07 1137 aa23.08■■□□□ 1.29
VEGFA-217ENST00000518538 TBC1D17Q9HA65 648 aa23.08■■□□□ 1.29
VEGFA-217ENST00000518538 ST7Q9NRC1 585 aa23.08■■□□□ 1.29
VEGFA-217ENST00000518538 DUS2Q9NX74 493 aaKnown RBP23.08■■□□□ 1.29
VEGFA-217ENST00000518538 CFAP97Q9P2B7 532 aa23.08■■□□□ 1.29
VEGFA-217ENST00000518538 DNMT3LQ9UJW3 386 aa23.08■■□□□ 1.29
VEGFA-217ENST00000518538 TRIOO75962 3097 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 A0A1W2PQC6 194 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 PIK3R2O00459 728 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 GLULP15104 373 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 STAT1P42224 750 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 TNK2Q07912 1038 aa23.07■■□□□ 1.28
VEGFA-217ENST00000518538 PDCLQ13371 301 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms