RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 NUP62CLQ9H1M0 184 aa6.52□□□□□ -1.37
MRPS28-203ENST00000518371 CLSTN2Q9H4D0 955 aa6.52□□□□□ -1.37
MRPS28-203ENST00000518371 DNMT3BQ9UBC3 853 aaKnown RBP6.52□□□□□ -1.37
MRPS28-203ENST00000518371 SALL4Q9UJQ4 1053 aa6.52□□□□□ -1.37
MRPS28-203ENST00000518371 CTNND2Q9UQB3 1225 aa6.52□□□□□ -1.37
MRPS28-203ENST00000518371 USTQ9Y2C2 406 aa6.52□□□□□ -1.37
MRPS28-203ENST00000518371 PCDHB5Q9Y5E4 795 aa6.52□□□□□ -1.37
MRPS28-203ENST00000518371 INSL5Q9Y5Q6 135 aa6.52□□□□□ -1.37
MRPS28-203ENST00000518371 CLUHO75153 1309 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 TCF20Q9UGU0 1960 aaKnown RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 MTMR11A4FU01 709 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 A8MXQ7 604 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 C2CD4DB7Z1M9 353 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 ZNF197O14709 1029 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 GABRDO14764 452 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 SLC16A3O15427 465 aaKnown RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 FGFR1OPO95684 399 aaKnown RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 HLA-DRAP01903 254 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 MYL4P12829 197 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 ALADP13716 330 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 BMP6P22004 513 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 WARSP23381 471 aaKnown RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 LMO2P25791 158 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 GTF2H1P32780 548 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 PIK3CAP42336 1068 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 PMS1P54277 932 aaKnown RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 ENPEPQ07075 957 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 PPP3CAQ08209 521 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 PAK1Q13153 545 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 MAPRE1Q15691 268 aaKnown RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 NFE2Q16621 373 aaPredicted RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 TPD52L1Q16890 204 aaPredicted RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 ZACNQ401N2 412 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 PABPC1LQ4VXU2 614 aaKnown RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 DCAF17Q5H9S7 520 aaPredicted RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 C1orf220Q5T0J3 134 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 TDRD10Q5VZ19 366 aaKnown RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 KRT39Q6A163 491 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 GET4Q7L5D6 327 aaPredicted RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 FILIP1Q7Z7B0 1213 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 LRRTM3Q86VH5 581 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 OSTM1Q86WC4 334 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 SPATA2LQ8IUW3 424 aaPredicted RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 ZDHHC14Q8IZN3 488 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 SPATA18Q8TC71 538 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 SPPL2BQ8TCT7 592 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 C2orf15Q8WU43 125 aaKnown RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 EDEM1Q92611 657 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 TAF4BQ92750 862 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 UBL7Q96S82 380 aaPredicted RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 SEPT5Q99719 369 aaPredicted RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 DUSP9Q99956 384 aaKnown RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 RTP3Q9BQQ7 232 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 PI4K2AQ9BTU6 479 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 SRRTQ9BXP5 876 aaKnown RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 KRTAP4-5Q9BYR2 181 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 GZF1Q9H116 711 aaPredicted RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 METTL14Q9HCE5 456 aaKnown RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 TMEM8AQ9HCN3 771 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 HCFC1R1Q9NWW0 138 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 ARMCX3Q9UH62 379 aaPredicted RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 GTF3C4Q9UKN8 822 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 CDH9Q9ULB4 789 aa6.51□□□□□ -1.37
MRPS28-203ENST00000518371 MRPS23Q9Y3D9 190 aaKnown RBP6.51□□□□□ -1.37
MRPS28-203ENST00000518371 TTC28Q96AY4 2481 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 MYBPHLA2RUH7 354 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 DDX3YO15523 660 aaKnown RBP6.5□□□□□ -1.37
MRPS28-203ENST00000518371 DCXO43602 365 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 HCRTO43612 131 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 ATP2C2O75185 946 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 TACC1O75410 805 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 SOAT2O75908 522 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 SMNDC1O75940 238 aaKnown RBP eCLIP6.5□□□□□ -1.37
MRPS28-203ENST00000518371 VNN1O95497 513 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 VNN2O95498 520 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 GNA14O95837 355 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 RPLP1P05386 114 aaKnown RBP6.5□□□□□ -1.37
MRPS28-203ENST00000518371 RHOP08100 348 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 POU2F2P09086 479 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 HAPLN1P10915 354 aaPredicted RBP6.5□□□□□ -1.37
MRPS28-203ENST00000518371 NPR3P17342 541 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 PTPN1P18031 435 aaKnown RBP6.5□□□□□ -1.37
MRPS28-203ENST00000518371 TRIM21P19474 475 aaKnown RBP6.5□□□□□ -1.37
MRPS28-203ENST00000518371 EPHA1P21709 976 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 MXI1P50539 228 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 CDH8P55286 799 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 RPL10AP62906 217 aaKnown RBP6.5□□□□□ -1.37
MRPS28-203ENST00000518371 CYP27A1Q02318 531 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 MTMR3Q13615 1198 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 VEPH1Q14D04 833 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 PHLDB3Q6NSJ2 640 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 TTI2Q6NXR4 508 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 SCARA5Q6ZMJ2 495 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 C4orf50Q6ZRC1 276 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 PDZD4Q76G19 769 aaPredicted RBP6.5□□□□□ -1.37
MRPS28-203ENST00000518371 LIMS2Q7Z4I7 341 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 FRMD5Q7Z6J6 570 aa6.5□□□□□ -1.37
MRPS28-203ENST00000518371 DNAJB7Q7Z6W7 309 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms