RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 GRM3Q14832 879 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 WTAPQ15007 396 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 KARSQ15046 597 aaKnown RBP3.78□□□□□ -1.8
CPNE3-204ENST00000517862 CLEC16AQ2KHT3 1053 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 SFRP5Q5T4F7 317 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 TCERG1LQ5VWI1 586 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 SEZ6L2Q6UXD5 910 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 Q71RC1 249 aaPredicted RBP3.78□□□□□ -1.8
CPNE3-204ENST00000517862 MTSS1LQ765P7 747 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 C11orf74Q86VG3 221 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 TMPRSS12Q86WS5 348 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 KIF18BQ86Y91 864 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 CPNE8Q86YQ8 564 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 CPA6Q8N4T0 437 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 C7orf31Q8N865 590 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 COLGALT1Q8NBJ5 622 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 CCDC191Q8NCU4 936 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 OR6J1Q8NGC5 347 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 ACER1Q8TDN7 264 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 PNISRQ8TF01 805 aaKnown RBP3.78□□□□□ -1.8
CPNE3-204ENST00000517862 SETD7Q8WTS6 366 aaKnown RBP3.78□□□□□ -1.8
CPNE3-204ENST00000517862 SLC22A17Q8WUG5 538 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 PDCD6IPQ8WUM4 868 aaKnown RBP3.78□□□□□ -1.8
CPNE3-204ENST00000517862 KCNE4Q8WWG9 221 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 SLC5A5Q92911 643 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 EXTL1Q92935 676 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 PHKBQ93100 1093 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 CLIP3Q96DZ5 547 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 KIRREL1Q96J84 757 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 ZFYVE21Q9BQ24 234 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 KXD1Q9BQD3 176 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 CLSTN3Q9BQT9 956 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 LZTS2Q9BRK4 669 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 CWC25Q9NXE8 425 aaPredicted RBP3.78□□□□□ -1.8
CPNE3-204ENST00000517862 GTF2IRD1Q9UHL9 959 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 KCNH3Q9ULD8 1083 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 PCDHGA9Q9Y5G4 932 aaKnown RBP3.78□□□□□ -1.8
CPNE3-204ENST00000517862 PCDHGA8Q9Y5G5 932 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 PCDHGA7Q9Y5G6 932 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 PCDHGA6Q9Y5G7 932 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 PCDHGA3Q9Y5H0 932 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 ZFC3H1O60293 1989 aaKnown RBP3.78□□□□□ -1.8
CPNE3-204ENST00000517862 RAD50Q92878 1312 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 CACNA1FO60840 1977 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 CCDC195A0A1B0GUA6 201 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 APAF1O14727 1248 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 EXTL3O43909 919 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 CBFA2T3O75081 653 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 ULK1O75385 1050 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 CXCL14O95715 111 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 IL33O95760 270 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 GH2P01242 217 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 SYPP08247 313 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 MYCLP12524 364 aaPredicted RBP3.77□□□□□ -1.81
CPNE3-204ENST00000517862 VAV1P15498 845 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 SLC9A1P19634 815 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 GNLYP22749 145 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 PAX3P23760 479 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 GRK2P25098 689 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 GRK3P35626 688 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 HNF1BP35680 557 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 CD96P40200 585 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 KCNAB2Q13303 367 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 LAPTM5Q13571 262 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 GALEQ14376 348 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 KIZQ2M2Z5 673 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 RTP2Q5QGT7 225 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 PMS2CLQ68D20 193 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 CXorf57Q6NSI4 855 aaKnown RBP3.77□□□□□ -1.81
CPNE3-204ENST00000517862 TAPT1Q6NXT6 567 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 DHRS13Q6UX07 377 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 EPM2AIP1Q7L775 607 aaPredicted RBP3.77□□□□□ -1.81
CPNE3-204ENST00000517862 FAM114A1Q8IWE2 563 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 DHX40Q8IX18 779 aaKnown RBP3.77□□□□□ -1.81
CPNE3-204ENST00000517862 FBXO16Q8IX29 292 aaPredicted RBP3.77□□□□□ -1.81
CPNE3-204ENST00000517862 SAMD3Q8N6K7 520 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 SVIPQ8NHG7 77 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 TGFBRAP1Q8WUH2 860 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 KCNN1Q92952 543 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 FBXW5Q969U6 566 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 TCTN2Q96GX1 697 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 FAXDC2Q96IV6 333 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 HEXIM2Q96MH2 286 aaKnown RBP3.77□□□□□ -1.81
CPNE3-204ENST00000517862 TESK2Q96S53 571 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 FOXP3Q9BZS1 431 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 XYLT2Q9H1B5 865 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 TMEM245Q9H330 911 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 TOPORSQ9NS56 1045 aaPredicted RBP3.77□□□□□ -1.81
CPNE3-204ENST00000517862 CATSPERZQ9NTU4 200 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 AP5S1Q9NUS5 200 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 MKS1Q9NXB0 559 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 HDAC6Q9UBN7 1215 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 TAGLN3Q9UI15 199 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 ANAPC2Q9UJX6 822 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 ENTPD4Q9Y227 616 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 INVSQ9Y283 1065 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 SPEF1Q9Y4P9 236 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 ZFP37Q9Y6Q3 630 aaPredicted RBP3.77□□□□□ -1.81
CPNE3-204ENST00000517862 U3KQE9 123 aa3.77□□□□□ -1.81
CPNE3-204ENST00000517862 DOCK6Q96HP0 2047 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms