RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 DRP2Q13474 957 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 TFDP1Q14186 410 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 HSP90AA2PQ14568 343 aaPredicted RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 MXD4Q14582 209 aaPredicted RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 LPIN1Q14693 890 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 KARSQ15046 597 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 ITPRIPL1Q6GPH6 555 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 HIBCHQ6NVY1 386 aaPredicted RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 CNKSR3Q6P9H4 555 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 ACAD11Q709F0 780 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 USP49Q70CQ1 688 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 DYMQ7RTS9 669 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 ZNF227Q86WZ6 799 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 KSR1Q8IVT5 923 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 TDHQ8IZJ6 230 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 AGGF1Q8N302 714 aaeCLIP2.98□□□□□ -1.93
SKP1-204ENST00000517691 C12orf50Q8NA57 414 aaPredicted RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 LRRN4CLQ8ND94 238 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 DBF4BQ8NFT6 615 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 RSRC1Q96IZ7 334 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 MRGPRX3Q96LB0 322 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 IFT74Q96LB3 600 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 RIPOR3Q96MK2 946 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 IPO9Q96P70 1041 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 FDXACB1Q9BRP7 624 aaPredicted RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 CHCHD6Q9BRQ6 235 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 MMTAG2Q9BU76 263 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 IFIH1Q9BYX4 1025 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 GCOM2Q9BZD3 368 aaPredicted RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 FOXQ1Q9C009 403 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.98□□□□□ -1.93
SKP1-204ENST00000517691 POLR3FQ9H1D9 316 aaPredicted RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 VPS11Q9H270 941 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 ADAMTS10Q9H324 1103 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 DHX33Q9H6R0 707 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 PLEKHA5Q9HAU0 1116 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 CYP4F12Q9HCS2 524 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 GPRC5CQ9NQ84 441 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 GPRC5BQ9NZH0 403 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 PCDHA7Q9UN72 937 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 ST3GAL5Q9UNP4 418 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 APOBEC2Q9Y235 224 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 ITIH6Q6UXX5 1313 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 IGKV6-21A0A0C4DH24 114 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 NPHP3-ACAD11A0A0J9YXS1 232 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 FAM170AA1A519 330 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 LRRIQ4A6NIV6 560 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 CCDC169A6NNP5 214 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 INO80B-WBP1J3KQ70 363 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 ASAP2O43150 1006 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 PRODHO43272 600 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 GAS2O43903 313 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 RNGTTO60942 597 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 PPP6R2O75170 966 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 CXCL10P02778 98 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 AMHP03971 560 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 SOD2P04179 222 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 ASLP04424 464 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 FGFR1P11362 822 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 PABPC1P11940 636 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 DARSP14868 501 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 CYP11B2P19099 503 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 PPM1AP35813 382 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 PRIM2P49643 509 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 GPC3P51654 580 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 RABGGTBP53611 331 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 COPAP53621 1224 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 NCBP1Q09161 790 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 MGAT3Q09327 533 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 GPNMBQ14956 572 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 TCTN1Q2MV58 587 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 TRIM61Q5EBN2 209 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 HABP4Q5JVS0 413 aaKnown RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 FBXO47Q5MNV8 452 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 PIK3R6Q5UE93 754 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 SPATA1Q5VX52 437 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 RINT1Q6NUQ1 792 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 CCDC73Q6ZRK6 1079 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 CCDC149Q6ZUS6 474 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 RTL10Q7L3V2 364 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 CATSPER4Q7RTX7 472 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 KCNK18Q7Z418 384 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 MILR1Q7Z6M3 343 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 TMCO2Q7Z6W1 182 aaPredicted RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 GPBP1Q86WP2 473 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 SMYD4Q8IYR2 804 aaPredicted RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 MYOCDQ8IZQ8 938 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 TMEM130Q8N3G9 435 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 USP38Q8NB14 1042 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 RNF149Q8NC42 400 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 RNF169Q8NCN4 708 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 GSTCDQ8NEC7 633 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 MCPH1Q8NEM0 835 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 BHLHE22Q8NFJ8 381 aaPredicted RBP2.98□□□□□ -1.93
SKP1-204ENST00000517691 OR2W6PQ8NHA6 318 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 PPP1R35Q8TAP8 253 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 DEPTORQ8TB45 409 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 HERVK_113Q902F9 699 aa2.98□□□□□ -1.93
SKP1-204ENST00000517691 RAD54LQ92698 747 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms